| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1341 |
|---|
| Symbol | |
|---|
| ID | 6475196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1531519 |
|---|
| End bp | 1532628 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642730509 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002027729 |
|---|
| Protein GI | 194365119 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.670144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC GTATCCTCAC GCTCGGCCTG GCCTCCGCCA TGCTTGCCGC CTGCAGCGGT
GGCAATGGTG GCGCGCAGGA CAGCCAGGTC CTGAACGTCT ACAACTACAG CGACTACATC
GCCGAGGACA CCATTCCGAC CTTCGAGAAG GAGAGCGGGA TCAAGGTGAC CTACGATGTG
TTCGACAGCG ATGAGATGGT CGAGACCAAG CTGCTGGCCG GCAACAGCGG CTACGACGTG
GTGGTGCCGA CCCTGAACTT CTTCGGTCGC CAGATCCAGG CCGGCGTGTT CCTGCCGCTG
GACAAGAGCA AGATCCCGAA CCTGGCCAAC CTCGATCCGG CGGTGATGAA GCGCATCGCC
ACCCAGGATC CGGGCAACCA GTACGGCGTG CCGTACATGA TCGGTACCAC CGGCATCGGC
TACAACGTGG AGATGCTGAA GCAGCGCTTC GGCGGCAGCA CCGACATCGC CAACAGCTGG
GACCTGGTGT TCAAGCCGGA GAACATCAGC AAGATGAAGG ACTGCGGCGT GACCATCCTG
GACACGCCGG CGGACATGAT CCCGATCGCG CTGCATTACC TGGGCCTGGA CCCGCACAGC
GGTGACCCGG CCGAGCTGCA GAAGGCGGCC GACCTGCTGA AGTCGATTCG CCCCTACGTG
CAGAATTTCC ACTCCTCGCA GTACGTGGGG TCGCTGGCCA ATGGCGGCAC CTGCCTGGTG
GTCGGCTGGT CGGGTGACAT CATCCAGGCC CGCGACCGCG CCGAGGAGGC CAGCAACGGC
GTGCACGTGG CCTATTCGAT CCCGAAGGAA GGCGCCCCGC AGTGGTTCGA CATGCTGGCG
ATCCCGAAGG ATGCCAAGCA TCCGGAAGCC GCATACGCCT TCATCAACTA CCTGCTGCAG
CCGAAGGTTG CCGCGGCCAA CACCAACTTC ATCCACTACG CCAACCCGGT GCCGACCGCG
ACCCCGCTGG TGGATGAGGC GATCCGTACC GACCCGACCA TCTACCCGCC GGCCGACGTG
GCCGAGAAGA TGTTCACCTA TTCGATCAAC ACGCCGGAAA CCGACAAGCT CTACACCCGG
CTGTGGACCG AAGTGAAGAC TGGCAGGTAA
|
|---|
| Protein sequence | MKLRILTLGL ASAMLAACSG GNGGAQDSQV LNVYNYSDYI AEDTIPTFEK ESGIKVTYDV
FDSDEMVETK LLAGNSGYDV VVPTLNFFGR QIQAGVFLPL DKSKIPNLAN LDPAVMKRIA
TQDPGNQYGV PYMIGTTGIG YNVEMLKQRF GGSTDIANSW DLVFKPENIS KMKDCGVTIL
DTPADMIPIA LHYLGLDPHS GDPAELQKAA DLLKSIRPYV QNFHSSQYVG SLANGGTCLV
VGWSGDIIQA RDRAEEASNG VHVAYSIPKE GAPQWFDMLA IPKDAKHPEA AYAFINYLLQ
PKVAAANTNF IHYANPVPTA TPLVDEAIRT DPTIYPPADV AEKMFTYSIN TPETDKLYTR
LWTEVKTGR
|
|---|
| |