| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1338 |
|---|
| Symbol | |
|---|
| ID | 6475193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1527836 |
|---|
| End bp | 1529113 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642730506 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002027726 |
|---|
| Protein GI | 194365116 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCTTCCCGCC CAGCTGGTAC GCCGCCAGCT TGCCCGAGCC GCCCGCACTT
CCCTCGCTGC AGGGGAATGT GCAGGCCGAT GTCGCAGTGC TTGGCGCGGG CTACACCGGC
CTGACCGCAG CACTGGAACT GGCTACGCGT GGCCAGCGCG TGGTGGTGCT GGACGCGCAG
CGGATCGGTT GGGGCGCGTC CGGTCGCAAC GGTGGCCAGG CGCTGGTGGG CTATGGCTGC
GAGGTGGGCG AGCTGGAGCG CCAGCTCGGC CGCGACGATG CGCGCCACCT GTTCGACTGG
TCGCGTGACG CGGTGCAGGC GATGCGCACC CGCATCGATC GCCACGGCAT CGACTGCCAT
TGGGTGGAAG GCCATGCCAG CGTCGCCATC CGCGAACGGC ATGAGCGTGA ACTACTGGCC
AACTGCGAGC ACCTGCAGCG CCACTACGAC TACCCGATGC AATGGTGGAA CCGTGATGCC
CTGCGCGCGC AGCTGGACAG CCCACGCTAC CGCGCCGCGA TGTTCGACCC GCTCAGCGCG
CACCTGCAAC CGCTGGCGTA TGCACGCGGG TTGGCCGATG CGGCGCGCGC CGCCGGCGTG
GTGATCCACG AGAACTCCGC GGTGACCCGC GTGCAGCGGG GACCACAGCC TTCCCTGCAT
ACCGCTCAGG GCAGCGTGCG CGCTGCGCAT CTGGTGGTGG CCGGCAACGC CTGGCTGCAG
GGCCTGCTGC CCGAGCTGGA ACGGCGGATC ATGCCGGTGG GCACCTATAT CGGCGCCAGC
CAGCCGCTGG GTGCTGAACG CGCCCGGGCC CTGATCGGCA ACAACATGGC CGTGGCCGAC
ACCGCATGGG CTCTGGACTA CTTCCGCCTC AGCCACGACC ACCGGCTGCT GTTCGGCGGC
CGCGCCAGCT ACTCGGCCCT GCCCCCACCC GGCCTGCACG GCGTGATGCA GCGGCGCATG
CACCAGGTGT TCCCGCAGCT GGCCGACGTG GCCCTGGACC AGGTCTGGGG CGGTTATGTG
GACATCACCC GCAACCGCGC CCCGCACTGG GGCCGGCTGG ACGGCAATCT GTACTTCGCA
CAGGGCTTCT CCGGCCATGG GGTGGCCGCC GCCGGGCTGG CCGGCGAGGT GATCGCCGCC
GCCATTGCCG GCCAGAGCGA GCGTCTGGAC GTGTTCCAGC GCCTGCGGCA TGCCCCCTTC
CCCGGTGGCC GGCTGCTGCG CACGCCGCTG CTGGTGGCGG CGATGTCCTG GTACAAATTG
CGGGATGCGT TGTGGTGA
|
|---|
| Protein sequence | MSAAFPPSWY AASLPEPPAL PSLQGNVQAD VAVLGAGYTG LTAALELATR GQRVVVLDAQ
RIGWGASGRN GGQALVGYGC EVGELERQLG RDDARHLFDW SRDAVQAMRT RIDRHGIDCH
WVEGHASVAI RERHERELLA NCEHLQRHYD YPMQWWNRDA LRAQLDSPRY RAAMFDPLSA
HLQPLAYARG LADAARAAGV VIHENSAVTR VQRGPQPSLH TAQGSVRAAH LVVAGNAWLQ
GLLPELERRI MPVGTYIGAS QPLGAERARA LIGNNMAVAD TAWALDYFRL SHDHRLLFGG
RASYSALPPP GLHGVMQRRM HQVFPQLADV ALDQVWGGYV DITRNRAPHW GRLDGNLYFA
QGFSGHGVAA AGLAGEVIAA AIAGQSERLD VFQRLRHAPF PGGRLLRTPL LVAAMSWYKL
RDALW
|
|---|
| |