| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1293 |
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| Symbol | |
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| ID | 6475148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1473936 |
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| End bp | 1476395 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642730461 |
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| Product | ribonuclease R |
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| Protein accession | YP_002027681 |
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| Protein GI | 194365071 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.611528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA AAAAACCAAG CAAGGGCGGG ACCACGTCCC GCAGCCAGGC CCCTAAGAAG
GGCGCCAAGG CGGGCGCAGC CCGCACCACC AAGCCGGGCA AGCCGCTGCC GGGCTGGCTC
CCGGAATTGG CCGACGGTGG CGCTCCGCCA CGTGGCCGCA GGATCCGTAG CGCTGATGCC
CCGGGCCCGG CCCCTGGCCG CAAGCTGCCG CCGACCGGCA AAGTGATCGA CGATCCTTAT
GCCGCCCGCG AAGCAGAGAA ATACGAACAG CCCATCGCCA GCCGCGAGGC CATCCTGGCC
CTGCTGGAAC GTTGCGAAGG GCCGCAGACT GCCGAGGAGC TGGGTGCACG CCTGGGCCTG
GGCGCGCCTG ACCGTGCCGA GGCGCTGTCG CGCCGGCTCG GCGCCATGGT CCGTGACGGC
CAGCTGGTGC AGAACCGCCG CGGCGGCTTC GCACCGATCC AGACCCTCAA CCTGGTCACA
GGCGTGGTGA TCGCCAACCC GGAAGGGTTC GGCTTCCTGC GTCCGGTCGA GGGCGGCGAC
GACCTGTTCC TGCCGCCGTA TGAAATGCGC AAGGTGATGC ACGGCGACAA GGTGCTCGCC
CGCGTTACCG GCATCGACCA CCGTGGCCGA CGCGAGGGCA GCATCGCCCG CGTGCTGGAA
CGTGGCATGA CCCGTCTGAT CGGTCGCTTC AGCATCGAGA TGGGCATCAA TTACGTGGTG
CCCGATGACA AGCGCATCCA GCGCAACGTG CAGGTACCGC CGGATCAGAC CGGTGGTGCG
CGCGACGGCC AGCTGGTGGT CTGCGAACTG ACCCAGGCGC CGGACAGCCG GCGTCCGCCG
ATCGGTCGCA TCATCGCGGT GCTCGGCGAC AAGCTGACCG CCTCGCTGGT GGTGGAGACC
GCCATCCACG GCCATGAACT GCCGTTCGAG TTCCCGCAGG AGGTGTTGGA CGAAGCCGCG
TCGGTGCCGC TGGTGGTCGA GCCGGCGATG ATCGGCGACC GCGTCGACCT GCGCAGCACG
CCGCTGGTCA CCATTGATGG CGAGGACGCC AAGGATTTCG ACGACGCGGT GTACTGCGAG
CCGAACGCCG ATGGTTTCCG CTTGGTGGTG GCCATTGCCG ATGTCTCCAA CTACGTGCGT
CCCGGCACGC CGCTGGACGA GGAGGCACAG AAGCGTGCGA CCTCGGTGTA CTTCCCGGGC
TTCGTGGTGC CGATGCTGCC GGAGACCCTG TCCAACGGTA TCTGCTCGCT GATGCCGAAG
GTCGACCGCA TGTGCTTCGT CTGCGACATG CAGATCGATC GCGATGGCGT GGTTTCCCAC
TCGCGCTTCT ACGAAGCGGT GATGAATTCG CACGCACGCC TGACCTACAC CCAGGTCTGG
CAGGCGGTGG GCGAGGACGA TGCTGGCGCG AAGGCGTTCA TCGGCGACCT GCTGCCGCAG
GTGCAGCGCC TGCACCAGCT GTACAAGGTG CTGGCCAAGG CACGCGCCAA GCGCGGCGCC
ATCGAGTTCG AGAGCAGCGA AGTACGCTTC GTTCTGGACA ACCGTGGCGA AGTGACCCAG
GCCGGGATGC TGGTGCGCAA CGACGCACAC AAGCTGATCG AGGAATGCAT GATCGCGGCC
AACGTGGAGG CAGCAAAGTA CCTGCTGTCG CGCCATGTGC CGGCCCCGTA CCGTGTGCAT
GAGAAGCCGC CGGAGACCAA GTACGCCGAC CTGCTGGAGT TCCTGAAGGA ATTCAAGCTG
AGCCTGCCGC CGTGGTCGAA GGTGCGCCCG GGTGATTACA CCAAGCTGCT GAAGAAGATC
CGCGACCGCC CCGATGCAAC GCTGCTGGAG TCTGTACTGC TGCGCAGCCA GAGCCTGGCC
GTGTACAGCC CGGACAACAA TGGTCATTTC GGCTTGGCAC TGGAGGCGTA CGCGCACTTC
ACCTCGCCGA TCCGTCGCTA TCCCGACCTG CTGGTGCATC GCGCGATCAA GCACGCGTTG
TCCGGCAAGC CGCTGGACAA GTTCACCTAC AACGCGCGCG AGATGGCGGC GTTGGCGCTG
CAGTGTTCCG AGCGCGAGCG CCGTGCCGAC GAGGCCGAAC GCGAAGTCGA CGAGCGCTAC
CGCGCGGCGT GGATGGAAAA GCACGTGGGT GGCCAGTTCG ATGGCGTGAT CAGCGGCGTG
ACCAGCTTCG GTCTGTTCGT TGAGCTGGCC GATTCGAAGG TGCAGGGCCT GGTCCACGTG
ACCCAGTTGC CGCAGGACTA TTACAAGTTC GATGCGACCC GCAAGACGCT GACCGGTGAA
CGCCGTGGCA GCAGCTACCG ATTGGGTGAC CAGGTACGCA TTCTGGTGCT GAAGGCCAGC
ATGGAAGAAC GCAAGATCGA CTTCCGCCTG GTCGAGCACA AGGGCGAGGA AGAGGGTGAC
GGCCTGCCGC CGCTGCCCGA GCGTGGCAAG CCGGCCAAAC GCACCAAGAA GCAATATTGA
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| Protein sequence | MTTKKPSKGG TTSRSQAPKK GAKAGAARTT KPGKPLPGWL PELADGGAPP RGRRIRSADA
PGPAPGRKLP PTGKVIDDPY AAREAEKYEQ PIASREAILA LLERCEGPQT AEELGARLGL
GAPDRAEALS RRLGAMVRDG QLVQNRRGGF APIQTLNLVT GVVIANPEGF GFLRPVEGGD
DLFLPPYEMR KVMHGDKVLA RVTGIDHRGR REGSIARVLE RGMTRLIGRF SIEMGINYVV
PDDKRIQRNV QVPPDQTGGA RDGQLVVCEL TQAPDSRRPP IGRIIAVLGD KLTASLVVET
AIHGHELPFE FPQEVLDEAA SVPLVVEPAM IGDRVDLRST PLVTIDGEDA KDFDDAVYCE
PNADGFRLVV AIADVSNYVR PGTPLDEEAQ KRATSVYFPG FVVPMLPETL SNGICSLMPK
VDRMCFVCDM QIDRDGVVSH SRFYEAVMNS HARLTYTQVW QAVGEDDAGA KAFIGDLLPQ
VQRLHQLYKV LAKARAKRGA IEFESSEVRF VLDNRGEVTQ AGMLVRNDAH KLIEECMIAA
NVEAAKYLLS RHVPAPYRVH EKPPETKYAD LLEFLKEFKL SLPPWSKVRP GDYTKLLKKI
RDRPDATLLE SVLLRSQSLA VYSPDNNGHF GLALEAYAHF TSPIRRYPDL LVHRAIKHAL
SGKPLDKFTY NAREMAALAL QCSERERRAD EAEREVDERY RAAWMEKHVG GQFDGVISGV
TSFGLFVELA DSKVQGLVHV TQLPQDYYKF DATRKTLTGE RRGSSYRLGD QVRILVLKAS
MEERKIDFRL VEHKGEEEGD GLPPLPERGK PAKRTKKQY
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