| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1278 |
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| Symbol | |
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| ID | 6475130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1453713 |
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| End bp | 1454840 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730443 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002027666 |
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| Protein GI | 194365056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.645839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG TCCTCGACCT GACCTGCGAA CTGATCGCAC GACCCTCGGT GACGCCGGAT
GATGCTGGCT GCCAGACACT GCTGGCGGCA CGCCTGAAGC AGGCCGGGTT CCAGTGCGAT
CACCTGCGCC TGGGCGAGGT CGACAACCTG TGGGCGACCC ATGGGCAGGG TGCGCCGGTG
CTGGTGCTGC TGGGCCACAC CGACGTGGTG CCGCCCGGCC CGCGCGAGGC CTGGGCCAGC
GATCCGTTCA CGCCGCAGAT CCGTGAGGGT GTGCTGTACG GCCGTGGCAC CGCCGACATG
AAGGGCAGCG TGGCGGCGTT CGTGGTGGCC GCCGAGCAGT TCGTGGCCGC GCATCCCGAT
CATACCGGCA CGCTGGCGGT GCTGCTGACC AGCGACGAGG AGGGCGATGC CATCGATGGC
GTGCGCCACG TTGCACGGCT CTTCGCCGAG CGCGGCCAGC GCATCGACTG GTGCATCACC
GGCGAGCCGT CGTCGACCGC GACGCTGGGT GACCTGCTGC GCGTGGGTCG TCGCGGCAGC
CTGTCGGCCA AGCTGCGCGT GCAGGGCGTG CAGGGTCATG TGGCGTATCC GGAGAAGGCA
CGTAACCCGA TCCACCAGGC GGCGCCGGCC CTGGCCGAGC TGAGTGCGCG GCGCTGGGAT
GACGGCTACG AGAGTTTCCC GCCGACCAGC CTGCAGATCT CCAACATCCA TGCCGGTACC
GGTGCCAACA ATGTGATTCC CGGCGAGCTG GAGGTGGATT TCAACATCCG CTACAACCCG
CACTGGGATG CGCCGAAGCT GGAGGCGGAG ATCACTGCAC TGTTGGACCA GCATGGCCTG
CAGTACACGC TCAAGTGGCA TCGCAGCGGT GAGCCGTTCT ACACCCCGGA AGGCACGCTG
CGTGCGACTG CGCGCGCGGT ACTGGCCGAG CACATCGGCC GCGCACCGGA AGAAAGCACC
GGCGGAGGCA CCTCCGATGC ACGCTTCATC GCGCCGCTGG GCGCGCAGTG CATCGAAGTG
GGGCCGGTCA ACGCCAGCAT CCACCAGGTG GACGAGAACG TGCGCGTGGA CGAGCTGGAA
GCACTGCCGG GGTTGTACCA GCGGCTGGTG GAACGGTTGC TGGTGTGA
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| Protein sequence | MSAVLDLTCE LIARPSVTPD DAGCQTLLAA RLKQAGFQCD HLRLGEVDNL WATHGQGAPV
LVLLGHTDVV PPGPREAWAS DPFTPQIREG VLYGRGTADM KGSVAAFVVA AEQFVAAHPD
HTGTLAVLLT SDEEGDAIDG VRHVARLFAE RGQRIDWCIT GEPSSTATLG DLLRVGRRGS
LSAKLRVQGV QGHVAYPEKA RNPIHQAAPA LAELSARRWD DGYESFPPTS LQISNIHAGT
GANNVIPGEL EVDFNIRYNP HWDAPKLEAE ITALLDQHGL QYTLKWHRSG EPFYTPEGTL
RATARAVLAE HIGRAPEEST GGGTSDARFI APLGAQCIEV GPVNASIHQV DENVRVDELE
ALPGLYQRLV ERLLV
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