| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1275 |
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| Symbol | dapD |
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| ID | 6475127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1451350 |
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| End bp | 1452441 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642730440 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002027663 |
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| Protein GI | 194365053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.140711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.593313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA AGCCCGCCAA GAAAGTTCCA CAACAGCCGA AGGCTGGTCA GACTGCCGCG
ACCACCAAGA GCGCAGCGGC CCGGAAAACT GCTGCCGTCA CGCCGGCCGC GAAGAAGGCC
GCTGCGCCGA AGAAGGCCGC TGCAGTGAAG GCCCCGGTGA AAAAAGCCGC AGCAGCGAAG
AAGGCTCCGG CCAAGAGCGC TGAAACCACG CGCGCCGAGA CCATCGCCCG CAAGTCGCTG
CGCAAGCCGG CGTCGCCGGG CGTGGAAGAA CTTAAGTTCG GCATCGAGAG CGCCTTCGAG
CGCCGCGCCA CGCTGACCCT GCACGAGCTG GAAGGCTCGA CCAAGCCGCT GGTCAACCGC
GTGATCGATG GCCTGGAGAG CGGCGAATTC CGCGTTGCCG AGCCGGACGG CCACGGCGGC
TGGAAGGTCA ACGAGTGGTT GAAGAAGGCG GTGCTGCTGT ATTTCCGCGT CAATGACATG
GCCGTGGTCG ACGCAAAGCC GGCGCCGTTC TGGGACAAGG TCGAATCGCG CTTTGCCGGC
TATGACGAGG CGAAGTTCCG CCGTGGCGGC GTGCGCGTGG TGCCGGGGGC AATCGCCCGC
CGCGGCACCT ACTTCGGCAA GGACGTGGTG CTGATGCCGA GCTTCACCAA CATCGGCGCC
TACGTCGGCG AAGGCACCAT GGTCGATACC TGGGCCACCG TGGGTTCGTG CGCGCAGATC
GGCCAGCATT GCCACCTGTC CGGCGGCGCT GGCATCGGCG GTGTGCTGGA ACCGCTGCAG
GCCAGCCCGA CCATCATCGA GGACCACTGC TTCATCGGTG CGCGTTCGGA AGTGGTGGAA
GGCGTGGTGG TCGGCCACCA CAGCGTGATC GGCATGGGCG TGTTCCTCAG CCAGAGCACC
CGCATCTACA ACCGTGCCAC CGGCGAGATC AGCTACGGCT ACATCCCCCC GTACAGCGTG
GTGGTGTCCG GCTCGTTGCC GAGCAAGGAC GGTACCCACT CGCTGTACTG CGCGGTGATC
GTCAAGCAGG TTGATGCCAA GACCCGCAGC AAGACCAGCG TCAACGACCT GCTGCGCGGC
CTGGCCGACT GA
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| Protein sequence | MATKPAKKVP QQPKAGQTAA TTKSAAARKT AAVTPAAKKA AAPKKAAAVK APVKKAAAAK
KAPAKSAETT RAETIARKSL RKPASPGVEE LKFGIESAFE RRATLTLHEL EGSTKPLVNR
VIDGLESGEF RVAEPDGHGG WKVNEWLKKA VLLYFRVNDM AVVDAKPAPF WDKVESRFAG
YDEAKFRRGG VRVVPGAIAR RGTYFGKDVV LMPSFTNIGA YVGEGTMVDT WATVGSCAQI
GQHCHLSGGA GIGGVLEPLQ ASPTIIEDHC FIGARSEVVE GVVVGHHSVI GMGVFLSQST
RIYNRATGEI SYGYIPPYSV VVSGSLPSKD GTHSLYCAVI VKQVDAKTRS KTSVNDLLRG
LAD
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