| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1267 |
|---|
| Symbol | |
|---|
| ID | 6475119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1442002 |
|---|
| End bp | 1442715 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642730432 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_002027655 |
|---|
| Protein GI | 194365045 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.475835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC TGTTGCTGTG TCTGGCGCTG TCAGCTGTAC CGCGCCTCAG CTACGGCCTG
GAGCTGTCCA GCACCGAAGT GCGGTTGTCG GCTGCACGCG CCGACGGTGA ACTGTGGTTG
CGCAACACCG ACGCCACCGG CTGGAGCGGC CAGGCCCGAC TGTACCGCTG GGAGCAACAG
GAGCAGAGCG AAGTGCTGTT GCCCGCCGAC GACGTGGCCG TGAGCCCGGC CCGACTGGAG
ATCGCTGCAG GCCAGCGGCA GAGGCTCCGC CTGGTCAGCC TGGCCCCGCC CCCGGCCGGC
GTGCAGCGGG CCTACCGGCT GGTGATAAGC CCGGCGCCAG ACCTGCCATC TGCGCTGGCC
ATCCGCTACT CATTGCCGGT GTTCCTGGAC CCACCCACCC CGGTGACAGC AGCCCTGCAG
GTGCAGGTGC GCTCCCCTCC CGGCCTGCCC CCGCAGCTGT GGCTGCATAA TGGCGGCTCC
GGCCGTGCCC AGCTGGTGGA CCTGGTGTTT GTTGATTCCC GCGGCCACCG CCAGCACCTG
ATCGACGGGC TGGTCGGCTA CGTGCTGCCG GGGCGCGCCC GCCTGTGGGC GCTTCCATGG
CGAGCCGATG CCTACGCGGG CGGGGGGTTC AGGGCCCGCC TGAACCATGC CGGCGAGGCC
GCGCTGGACG CCGCTCCCCC GTCATTTGCG GCAGCTGCCG CCGCCGGGCT ATAA
|
|---|
| Protein sequence | MLRLLLCLAL SAVPRLSYGL ELSSTEVRLS AARADGELWL RNTDATGWSG QARLYRWEQQ
EQSEVLLPAD DVAVSPARLE IAAGQRQRLR LVSLAPPPAG VQRAYRLVIS PAPDLPSALA
IRYSLPVFLD PPTPVTAALQ VQVRSPPGLP PQLWLHNGGS GRAQLVDLVF VDSRGHRQHL
IDGLVGYVLP GRARLWALPW RADAYAGGGF RARLNHAGEA ALDAAPPSFA AAAAAGL
|
|---|
| |