Gene Smal_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1261 
Symbol 
ID6475113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1435908 
End bp1436675 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID642730426 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_002027649 
Protein GI194365039 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.604187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAG TCCCGCCTCC GCTGCCGGCT GCCCTGCCCC GCCACATCGC CATCATCATG 
GATGGCAATG GACGTTGGGC ACAGCAGCGC CGTCGTCCGC GCGTGATCGG CCACCGTGCC
GGCGCGCGCG CGGTCAACCG CACCATCGAG CGCTGCCTTG AACTGGGCAT CCCGGCGCTG
ACCCTGTTCG CCTTTTCCAG CGAGAACTGG GGCCGGCCGC AGGAAGAAGT CGATGCGTTG
ATGAAGCTGT TCCTCGGCGC GCTCGATCGC GAAGTGGACG AGCTGCATCG GCGTGGCGTG
CGCGTGCGCT TCATCGGCGA GCGCGAACGC TTCGGCGCCG GGCTGGTCAG CCGCATGCAG
CTGGCCGAGC AGCGCACCGC CGACAACACC ACCCTGACCC TGTCGATCGC CGCAAGTTAC
GGTGGCCGCC AGGACATCGC GCGTGCCGCG CGCGAACTGG CCGCCGAAGT CGCGGCAGGC
CGCCTGCTGC CCGAACAGAT CGACGAATCG CTGCTGGGCC GCCAGGTCGC GCTGGCCGAT
CTGCCACCGC CGGACCTGTT CATCCGCACC GGTGGCGACA CCCGCATCAG CAACTTCCTG
CTGTGGCAGC TGGCATATAC CGAGCTGTGG TTCACCGAGG CACTGTGGCC GGACTTCGAC
GCCGCCCTGC TGCAACAGGC GCTGGACGCC TATGGCAGCC GCGAGCGCCG CTTCGGCCTG
ACCAGCGCCC AGATCGCCGC ACTGGCCACC GAGACCACCA GCCCATGA
 
Protein sequence
MPSVPPPLPA ALPRHIAIIM DGNGRWAQQR RRPRVIGHRA GARAVNRTIE RCLELGIPAL 
TLFAFSSENW GRPQEEVDAL MKLFLGALDR EVDELHRRGV RVRFIGERER FGAGLVSRMQ
LAEQRTADNT TLTLSIAASY GGRQDIARAA RELAAEVAAG RLLPEQIDES LLGRQVALAD
LPPPDLFIRT GGDTRISNFL LWQLAYTELW FTEALWPDFD AALLQQALDA YGSRERRFGL
TSAQIAALAT ETTSP