| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1259 |
|---|
| Symbol | |
|---|
| ID | 6475111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1433882 |
|---|
| End bp | 1435072 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642730424 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_002027647 |
|---|
| Protein GI | 194365037 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.649657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCTG TCGCAGACCT GCGCCGGGTC GCCGTGTTCG GCGCCACCGG CTCGATCGGT
GCCTCCACGC TCGACGTGAT CGCCCGCCAT CCGCAGCGTT ACCGGGCCAC CGTGCTCGCC
GCCGGCCGCC AGGTGCAGGC GCTGCTGGCG CTGTGCCGGC AGCACCAGCC GGAGCATGCG
GTGATCGCCG ACGAATCGCT GTTTGCCGAG CTGCGCGACG GCCTGCGCCA AGCCGGCCTG
TCCACCGAGG CCCACGCCGG CCATGCCGCG CTGGACCAGT TGGCTGCCAG CGACGCCTGC
GACACCGTAG TCGCGGCGAT TGTCGGTGCC GCCGGGCTGT CCTCGACCCT GGCCGCTGCT
GCAGCCGGCA AGCGCATCCT GCTGGCCAAC AAGGAATCAC TGGTGCTGGC CGGCGAACTG
CTGACCCGTA CTGCCCAGCA GGCGGGCGCC GAGATCATCC CGATCGACAG CGAGCACAGC
GCGATCTTCC AGTGCCTGCG CTCGCGCGAC GCCAGTGTCG ATGGCGCCGG CGTGCGTCGC
ATCCTGCTCA CTGCGTCCGG CGGTCCATTC CGCGGCCGCA GCCGCGCCGA CCTCGCCGCG
GTCACCCCGG CGCAGGCCGT AGCCCACCCG AAGTGGTCGA TGGGCCCGAA GATCTCGGTC
GATTCGGCGA CGTTGATGAA CAAGGGCCTG GAAGTGATCG AGGCCCACCA CCTGTTCGGC
GTCCCCGGCG AGCGCATTGA CGTGCTGGTG CACCCGCAGA GCCTGGTCCA TTCGCTGGTC
GAGTTCGTTG ACGGTTCGAC CCTGGCCCAG ATGGGCCTGC CGGACATGCG CACCACCCTG
GCCGTTGGCC TCGGCTGGCC GCAGCGCATC GAATCGGGCG TGGCCGGGCT GGACCTGCTG
GCGCAGGGCC GGCTCGATTT CGAGGCCCCG GATACCGAGG CCTTCCCGTG CCTGGCGCTG
GCCTGGCAGG CCATGCAGGC CGGCGGCACC GCCCCGGCCG TGCTGAACGC CGCCAATGAA
GAGGCGGTTT CAGCGTTTCT TCAGGGCCGG ATCGGTTTCC TGACCATTCC GGAACTGGTT
GCTAACGCTC TTTCAACACT GCCGACCCAA GCAGCCGATA CACTTGAGGT TCTGTTGTCC
GCCGACCAGC GGGCACGCCA GCTCACCCTG AACACCATCG CCGCCGCCTG A
|
|---|
| Protein sequence | MNAVADLRRV AVFGATGSIG ASTLDVIARH PQRYRATVLA AGRQVQALLA LCRQHQPEHA
VIADESLFAE LRDGLRQAGL STEAHAGHAA LDQLAASDAC DTVVAAIVGA AGLSSTLAAA
AAGKRILLAN KESLVLAGEL LTRTAQQAGA EIIPIDSEHS AIFQCLRSRD ASVDGAGVRR
ILLTASGGPF RGRSRADLAA VTPAQAVAHP KWSMGPKISV DSATLMNKGL EVIEAHHLFG
VPGERIDVLV HPQSLVHSLV EFVDGSTLAQ MGLPDMRTTL AVGLGWPQRI ESGVAGLDLL
AQGRLDFEAP DTEAFPCLAL AWQAMQAGGT APAVLNAANE EAVSAFLQGR IGFLTIPELV
ANALSTLPTQ AADTLEVLLS ADQRARQLTL NTIAAA
|
|---|
| |