Gene Smal_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1252 
Symbol 
ID6475104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1425354 
End bp1426028 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID642730417 
ProductRibonuclease H 
Protein accessionYP_002027640 
Protein GI194365030 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.787291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.579547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC GCCACGCCGC AGCGGCCAGC CTGGCGCTGT TCGACGGCAA CGCGGTGATC 
GAGCCGGAGC GCCTGGTCGC CGGCGTCGAC GAAGCCGGCC GCGGCCCGCT GGCCGGGCCG
GTAGCGGTGG CGGCGGTGGT GTTCGACCCG GCGCGGCCAC GCATCAATGG CCTGGACGAT
TCCAAGCAGC TGACCGCGGC CCGTCGCGAG CAGCTGCATG ACCGCATCAT CGAACGGGCG
CTGGCCTGGC ACGTGGTGCT GGTGGACGTG GACACCATCG ACCGCCTGAA CATCTACCAG
GCGACCCTGC AGGGCATGCG CGACGTGGTC GCGGCCGTAG CCCATGTGGC GGGCTTCGCC
CGCATCGATG GCAACGTGGT GCCGAAGGGC CTGGTGCTGC CGGCACAGGC GCTGGTCGGA
GGCGACGGCA TCGACCGCGC GATCATGGCG GCCTCGATCC TGGCCAAGGT CTCGCGCGAC
CGTTACATGC TGGACGTGCA CTCCCGCCAC CCGCAATACG GCTTCGAGCA GCACAAGGGC
TACGGCACCC CGGCCCACCT GGCCGCCCTG CGCGAGCACG GTCCCTGCGT GGAGCACCGG
CGCAGCTTCG CCCCGGTGCG CGAGTGCCTG GAAGCGCCGC CGGCTGCGGC TGACATCGCC
ATCGCGATCG CCTGA
 
Protein sequence
MSRRHAAAAS LALFDGNAVI EPERLVAGVD EAGRGPLAGP VAVAAVVFDP ARPRINGLDD 
SKQLTAARRE QLHDRIIERA LAWHVVLVDV DTIDRLNIYQ ATLQGMRDVV AAVAHVAGFA
RIDGNVVPKG LVLPAQALVG GDGIDRAIMA ASILAKVSRD RYMLDVHSRH PQYGFEQHKG
YGTPAHLAAL REHGPCVEHR RSFAPVRECL EAPPAAADIA IAIA