| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1248 |
|---|
| Symbol | |
|---|
| ID | 6475100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1418910 |
|---|
| End bp | 1419365 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642730413 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002027636 |
|---|
| Protein GI | 194365026 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1981] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00701] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.236375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGCT ACTACTGGGT CAAGACCTTC CACATCGTGT TCGTGGTGGC GTGGATGGCG
ACGGTGTTCT ATCTGCCGCG CATCCTGGTG AACCTGGCCG AGACCGCTGG CCAGCCGGCG
GTGACCGAGC GCCTGCAGCT GATGGGCCTG CGCCTGTACC GCTTCGGCCA CTCGATGTTC
GGGTTGGCAT TCCTGCTGGG TCTGGTGCTG TGGCTGGGCT ACAAGGTCAT CCCGGATTTC
CCGACCATGG TCGCCGCGGG CGGTGCCGGT TGGTTGCACG CCAAGCTGGG CCTGGTGGTC
GTGCTGCTGG CGTATTTCAT CTGGATCGGG CGCCTGCTCA AGGGCGTGGC CAAGGGCAGG
GCGCTGCCGT CGTCGCGCGC GCTGCGCTGG ATCAACGAGA TCCCGCTGCT GGCCTTCATC
CCGATCGTGT GGCTGGTGCT GGCCAAGCCG TTCTGA
|
|---|
| Protein sequence | MQSYYWVKTF HIVFVVAWMA TVFYLPRILV NLAETAGQPA VTERLQLMGL RLYRFGHSMF
GLAFLLGLVL WLGYKVIPDF PTMVAAGGAG WLHAKLGLVV VLLAYFIWIG RLLKGVAKGR
ALPSSRALRW INEIPLLAFI PIVWLVLAKP F
|
|---|
| |