Gene Smal_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1245 
Symbol 
ID6475097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1415643 
End bp1416632 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID642730410 
Producthypothetical protein 
Protein accessionYP_002027633 
Protein GI194365023 
COG category[S] Function unknown 
COG ID[COG4709] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.256139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.208898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC CGAGCCTGGC AGGCAGTGCC CTGCCGACCA CCATTCCGCA GTATCTGGCG 
CAGCTGCGCG CGGCGCTGGA AGGCGCCGAC CCGGCGATGG TGCAGGACGC GCTGTACGAC
GCCGAGGAAT ATCTGCGCTC GGAGCTGGCA GCGCAGCCCG GGCGCAGCGA AACCGAGGTG
ATCGCCGACG TCGCCGGCAG CTATGGCGCG CCGGACGAAG TGGCCGAGAT CTACCGCGAG
ACCGAGGTGA CGGTGAACCG TGCGTTGCGC TCGCCGCGTG CGGATACTGC GCCGATGCTG
CGTGCGGCCG CGCAAGCGAG CGGTGTGGAG CCTGCCGCGC CGCCGCCGAC GCCGGTGCAG
CGCTCGCTGC TGGCGCGTTT CTTCGGCGTG GTGGCCGATC CGCATACCTA TGGTGCGCTG
TTCTACATGT TGCTGTCGCT GGCGACTGGC ACCTTCTTCT TCACCTGGGT GGTCACCGGG
CTGTCGCTGT CGCTGGGTCT GATGATCCTG ATCATCGGCA TCCCGTTGAC GGTGCTGTTC
TTCGGTTCGG TGCGCGGGCT GGCGCTGCTG GAAGGGCGAC TGGTGGAAGC GCTGCTGGGC
GAGCGCATGC CGCGCCGGCC GCAGTACACC GACCGCAGCC GCAGCTGGCT GCAGCGCATT
GGCGACATGT TCACCGATGG CCGCACCTGG CTGACGCTGC TGTACTTCGT GCTGATGCTG
CCGCTGGGCA TCATCTACTT CACCATCGCG GTGACGCTGC TGTCGCTGTC GCTGAGCCTG
ATCTGGGCAC CGGTCGCAGC GATCTTCAGT GGCGACATCC CCGGCGTGTA CATCAACGAC
GTGAACGTGC TGCCGATGGC GGCCTCGCCG CTGGTGGCGA TCGCGGTTGC CGCAGTGGGG
GCGCTGCTGC TGGTGCTGAC CCTGCATCTG GCACGCGGCA TCGGCAAGCT GCATGGGCTG
ATCGCCAAGA ACCTGCTGGT GCGGTTGTAA
 
Protein sequence
MNDPSLAGSA LPTTIPQYLA QLRAALEGAD PAMVQDALYD AEEYLRSELA AQPGRSETEV 
IADVAGSYGA PDEVAEIYRE TEVTVNRALR SPRADTAPML RAAAQASGVE PAAPPPTPVQ
RSLLARFFGV VADPHTYGAL FYMLLSLATG TFFFTWVVTG LSLSLGLMIL IIGIPLTVLF
FGSVRGLALL EGRLVEALLG ERMPRRPQYT DRSRSWLQRI GDMFTDGRTW LTLLYFVLML
PLGIIYFTIA VTLLSLSLSL IWAPVAAIFS GDIPGVYIND VNVLPMAASP LVAIAVAAVG
ALLLVLTLHL ARGIGKLHGL IAKNLLVRL