Gene Smal_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1243 
Symbol 
ID6475095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1414242 
End bp1415144 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID642730408 
Productputative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_002027631 
Protein GI194365021 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.768744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0956749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC GTCGTCGCCT TGCCCTGACC GCCCTCGCCC TCGCCTGCCT GCTGCCCGTC 
CTGGCCAGTG CGGCCTCGCC CTACCGCAGC CCGCAGCAGA TCCTCGATGC CTCGGCGGCC
AGCGACTGGC GCACGCCGGA CCCGGCCAAC CTGCTGTACA TGGACCTGCC GGCCGGGCGG
GTGATCATCG AGCTGGCGCC GCAGTTCGCC CCGCGGCATG TGGCCAACAT CCAGACCTTC
GCCCACGAGC ACTTTTGGGA CGGCACCAGC ATCTACCGTT CGCAGGACAA CTTCGTGGTG
CAGTTCGGCG ATGCCGACGC CGATGATGCG GCCAAGGCAA AGCCGTTCGG CAGTGCCGCG
CGCAAGCTGC CGGCCGAGTT CGAGCGCGCC AGCGCTGGCC TGAAGGTCAG CGTGCTGCCG
GACCGTGATG GCTGGGCGGC GCAGACCGGT TTCGTCGACG GCTTCCCGGT CGGCCAGGAC
CCACAGGCCG GCAAGGCCTG GCTGGCGCAC TGCTACGGCA TGCTCGGCGC TGGCCGCAGC
AACGAGGAAG ACAGCAGCAT CGGCGCAGAA CTGTACGTGG TGACCGGCCA GTCACCGCGT
CAGCTGGACC GCAACATCAC CCTGGTCGGT CGCGTGCTGA AGGGCATGGA ACTGCTCAGC
GCAACGCCGC GCGGACCGGC GCCGATGGGT TTCTATGCCG ACCCGAAGCT GCGTACGCCG
ATCGTGTCGA TCCGCCGCGC CAGCGATGTG CCGGTGGCCG AGCGCACGCC GATCCAGGTA
CTGCGTACTG ATTCAAAGAC GTTCGCCGAT ACGGTCGAAG CGCGACGCAA TCGTGTGGAC
GATTTCTACA AGCGCCCGGC GGGGCATATC GATCTTTGCA ATATTCCGGT ACCGGTGAAG
TAA
 
Protein sequence
MPHRRRLALT ALALACLLPV LASAASPYRS PQQILDASAA SDWRTPDPAN LLYMDLPAGR 
VIIELAPQFA PRHVANIQTF AHEHFWDGTS IYRSQDNFVV QFGDADADDA AKAKPFGSAA
RKLPAEFERA SAGLKVSVLP DRDGWAAQTG FVDGFPVGQD PQAGKAWLAH CYGMLGAGRS
NEEDSSIGAE LYVVTGQSPR QLDRNITLVG RVLKGMELLS ATPRGPAPMG FYADPKLRTP
IVSIRRASDV PVAERTPIQV LRTDSKTFAD TVEARRNRVD DFYKRPAGHI DLCNIPVPVK