Gene Smal_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1234 
Symbol 
ID6475086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1403130 
End bp1404689 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content65% 
IMG OID642730399 
Productbeta-lactamase 
Protein accessionYP_002027622 
Protein GI194365012 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.565811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.301621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT GGATTGGAGG AGCCGTGCTG CTGGCGTGCA CGACCATGGC GAATGCTGCG 
ACCCCGGAGC AGCTGCAGGA CCTGGATGCC ACCGTCGAGC GCGTGCGCGC ACAGTTCGAC
GTGCCCGGCA TTGCCGTGGC CGTGGTCAAG GATGGCCAGG TGGTGCTGGA ACGCGGCTGG
GGCGTGCGCG AGCAGGGCAA GCCGGAGCCG GTGCAGGCCG ATACCCTGTT TGCCATCGCT
TCCAATACAA AGGCGTTCAC CGCTACTTCG CTGAACCTGC TGGCAGAGGA CGGCAAGCTG
AAGATGGACG ACAAGGTGAT CGACCACCTG CCGTCGTTCC GCATGTCCGA CCCGTTCGTG
ACCGGCCAGA TGACGATCCG GGACCTGCTG TCGCACCGCA GCGGCCTGAG CCTGGGCGCC
GGTGACCTGC TGTTCTGGCC GACCACCTCC TACAGCAACG CCGAAGTGGT GGAGCGTCTG
GGCAAGGTGC CACTGAAGGG TGGGTTCCGC GAAAGCTACG CCTACGACAA CATCCTGTAC
GCGGTCGCCC AACAGGTGAT CGAACATGTC TCCGGCATGA GCTACCAGCA GTTCCTGCAG
ACCCGCATCT TCGACAAGGT GGGCATGGCC GGCACGCGCT ACAACGCCGA TCACCTGAAG
CCGGGCGACA AGGCGGCGGT CGGCCACGCC AAGTACGATT TCAAGGACCT GCGTACCGTT
GCACCGCTGA CCTGGTCGAA CAACGCCGGC GCCGGTGGCA TCTATTCCAG CGCGCACGAC
ATGGCGCGCT GGATGCAGGT GCAGCTGGCC GAGGGCAAGC TGGCCGATGG CACGCAGCTG
TTCAGCGACA AGAGCCAGCA GCAGATGTGG CGGATGATCA CGCCACAGTC GATCCCGGCG
TCGAGCGTGC CGGAGCTGGC ACCGGCGCGG GCCAACTTTG CCGGTTACGG CGAAGGCTGG
AGCCTGAGCG ACTACCGCGG GCAGAAACTG GTCTGGCACA CCGGTGGCTG GCCGGGCATG
GTTTCACGGC TGACTCTGGT GCCGGGCGAG AAGCTGGGCG TGGTGGTGCT GACCAACCAG
GAAGTGGGCG CAGCGTTCAA CGCGATCACC CTGAGCGTGC TTGATGCCTA TCTGGGCGGC
GAGAAGCACG ACTGGGTGGA TGCCTATGCC AAGGCCGTGG CCAAGGGCCA GGACAAGGCC
GACGAGGCCT GGGCCAAGCA CCAGGCGGCG CGCGACAAGG GCAGCAAGCC GTCGCTGGCA
CTGGCTGGCT ACAGCGGCAC CTTCCGCGAC CGCTGGTACG GCGACATGCA GGTCAGCGCC
GAGGGCAAGG GCCTGCGCCT GCGCTTCATG AAGACCGCGC AGCTGAGCGG CCGGCTGGAG
CATTGGCAGC ACGACACCTT CATCGTGCGC TGGGACGACC GTTCGCTCAA CGCCGATGCG
TTCGTGAACT TCAGCCTGGA CCCGGACGGC AAGGTGCGCG AGGTGCGCAT GCAGTCGATC
TCCGACCTGA CCGATTTCAG CTTCGATTTC CAGGACCTGC TGTTCACCCC GGCAACGTAA
 
Protein sequence
MKTWIGGAVL LACTTMANAA TPEQLQDLDA TVERVRAQFD VPGIAVAVVK DGQVVLERGW 
GVREQGKPEP VQADTLFAIA SNTKAFTATS LNLLAEDGKL KMDDKVIDHL PSFRMSDPFV
TGQMTIRDLL SHRSGLSLGA GDLLFWPTTS YSNAEVVERL GKVPLKGGFR ESYAYDNILY
AVAQQVIEHV SGMSYQQFLQ TRIFDKVGMA GTRYNADHLK PGDKAAVGHA KYDFKDLRTV
APLTWSNNAG AGGIYSSAHD MARWMQVQLA EGKLADGTQL FSDKSQQQMW RMITPQSIPA
SSVPELAPAR ANFAGYGEGW SLSDYRGQKL VWHTGGWPGM VSRLTLVPGE KLGVVVLTNQ
EVGAAFNAIT LSVLDAYLGG EKHDWVDAYA KAVAKGQDKA DEAWAKHQAA RDKGSKPSLA
LAGYSGTFRD RWYGDMQVSA EGKGLRLRFM KTAQLSGRLE HWQHDTFIVR WDDRSLNADA
FVNFSLDPDG KVREVRMQSI SDLTDFSFDF QDLLFTPAT