| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1227 |
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| Symbol | |
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| ID | 6475079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1395823 |
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| End bp | 1397487 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642730392 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002027615 |
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| Protein GI | 194365005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.594022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.072002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCA GGCAGTGGCG GTACGAAACA GGGACGCTGC TGGTCGTCCT GCTGATGGGA
GTGCTGTTTC CCGATCCGGC GCACGCGCGC ATGGCCGAGG CCGGCCGGGA TTTCCTGCTG
GTTGGTGCAC CTACGGATGA ACCGACGCCG CATCGTGGCT GCACGCCCGC GATGCTGGCC
GGGCCACGCG AGCAGGTAGA GGTATCGGCG CCTCCCGGGG GCTGGTCGGG GCAACCCCAG
GCCCTGGATG TGTTCAACGT GTTCGCTGGC GAAGTCCGCG TACAGCATGG CGACCGCGAG
ATCTGCGGCA ACATGCACGA TGCACGCACC CGTGATTCGC GCTTCCGTGC CGGCATCGGC
CTGGTGGCGG TGCCGGCGGC TGGCAGCCAT GAGCCGTTCC TGGTGTCGTG GCAGGCGCCG
CTGAAGGCGC GCTGGGTGCC GACGTTGCGG CTGGGTGCGC CCAGTCCGGT CCAGCAGAAC
GATACCGCCC GCCTGCTGGT GCGCGCGGCG TGCATCGCGG TGGCGATCGC GCTGGCGCTG
TCGGCATTGA TGGCTTACCT GACCACCCGT GACCGCAGCT TCCTGGTCTA CATCGGCGCG
ACGTTCGTGG TGGTGTTGTG GCAGGCGATT CTTGGCGGCT TGAGCGGCTA CCCCGAACCC
TGGCTGCCGG TGGGGGAGCG CGGCGCATGG TGGCTGCTGG CGCTGACCGC TGCGACCCAG
GCGCTGGTAC TGCCTGCTCT GTGGCGCCTC AACGGCGGGG ACCGCCTGCT GCCACGCTCG
CGGCCGGCAC AGCAGGGCGT GCTCTGGGGC CTGCTGGGGC TGGCCGCGCT GGTGCCGTGG
CTGCGCTGGG AAACCCTGGC GCTGGTCGCG GAGGGCCTGC AGCTGAGCTT CATCCTCGGT
TGCCTGCTGT CACTGGCCGC CGGCATACGG GCGTGGTTGC GTGGTGACTG CTGGGCGCTG
GCAGGCCTGG CGGCGCTGGT GCCGCTGCTG GTGATGATCG CCGCCGATGC CAGCAGTGCG
GGGTGGCTGC TGGAATACCG GGTGGAAGCG CTGCAGCTGT CGGTGACCTG GCTGCTGATG
ATGGCCGCCT ATGCCATGAA CCAGCGGCTG GGCCGACTGC GCCAGCAGCG CGATGAACTG
CGCCAGCTGG CCGAAACCGA TGGCCTGACC GGGCTACCCA ACCGCAGGGC CGGCCTGCAG
CAGCTGGCCC GTCACCTGGC GCAGGTCGAC CGTGAGCGCG GCCCGCTGGT GATCGGTTTC
CTGGACATCG ACCTGTTCAA GGACATCAAC GACCGCCATG GCCACGCGGT GGGCGACCAG
GTGCTGGTGG CGGTAGCGCG AGCCCTGCGC ACGGCAGTCC GCAGCCAGGA CGAAGTGGTG
CGGATGGGCG GCGAGGAGTT CCTGCTGCTG ATGCCGGGCA TGCCGCGCGA AACGGCGTCG
GCCCGGCTGG ATCGGCTGCG CCAGCGCATC ATCGAGGCCG GCCAGGCATT GCAGGTCCCT
GGGCTGGAGG TCACAGCCAG CATCGGGCTG GCACAGTGGC GGCCGGGCGA GGATGATCTG
GCCGCGCTGC TACGCCGGGC CGACCATGCC ATGTACGTGG CCAAGCGGGC GGGCCGCAAC
CGGGTCTTCG ATGGTGAAGA ACTCGATCCA CCCGTGCCGG AATGA
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| Protein sequence | MGVRQWRYET GTLLVVLLMG VLFPDPAHAR MAEAGRDFLL VGAPTDEPTP HRGCTPAMLA
GPREQVEVSA PPGGWSGQPQ ALDVFNVFAG EVRVQHGDRE ICGNMHDART RDSRFRAGIG
LVAVPAAGSH EPFLVSWQAP LKARWVPTLR LGAPSPVQQN DTARLLVRAA CIAVAIALAL
SALMAYLTTR DRSFLVYIGA TFVVVLWQAI LGGLSGYPEP WLPVGERGAW WLLALTAATQ
ALVLPALWRL NGGDRLLPRS RPAQQGVLWG LLGLAALVPW LRWETLALVA EGLQLSFILG
CLLSLAAGIR AWLRGDCWAL AGLAALVPLL VMIAADASSA GWLLEYRVEA LQLSVTWLLM
MAAYAMNQRL GRLRQQRDEL RQLAETDGLT GLPNRRAGLQ QLARHLAQVD RERGPLVIGF
LDIDLFKDIN DRHGHAVGDQ VLVAVARALR TAVRSQDEVV RMGGEEFLLL MPGMPRETAS
ARLDRLRQRI IEAGQALQVP GLEVTASIGL AQWRPGEDDL AALLRRADHA MYVAKRAGRN
RVFDGEELDP PVPE
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