Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1225 |
Symbol | |
ID | 6475077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1391122 |
End bp | 1393062 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730390 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002027613 |
Protein GI | 194365003 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.115574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG AATCCCAAGC GCAGCTGCAG TTCGCGCAGC TCGGCCTGTC CGAGTCTGTC ATGCAGGCGG TCACCGCCAT CGGCTACGAA ACCCCGTCGC CGATCCAGGC TGCCACCATT CCGGCGATGC TGGAAGGCCG TGACGTGCTG GGCCAGGCCC AGACCGGTAC CGGCAAGACC GCCGCCTTTG CGCTGCCGGT ACTGTCCAAC ATCGACCTGC AGCAGATCAA GCCGCAGGCG CTGGTGCTGG CCCCGACCCG CGAGCTGGCC ATCCAGGTCG CCGAGGCGTT CCAGTCCTAT TCCTCGAAGA TCCCCGGCTT CCGCGTGCTG CCGGTGTACG GCGGCCAGCC GTACGGCCAG CAGCTGTCGG CGCTGCGTCG CGGCGTGCAC ATCGTGGTCG GTACCCCCGG CCGCGTCATC GACCACCTGG ATCGCAGCAC GCTGGACCTG TCCGAGCTGA AGACGCTGGT GCTGGACGAA GCCGACGAAA TGCTGCGCAT GGGCTTCATC GACGACGTCG AAGCCGTGCT GAAGAAGCTG CCGGCCAAGC GCCAGGTCGC CCTGTTCTCG GCCACGATGC CGCCGCAGAT CCGCCGCATC GCGCAGACCT ACCTGCAGGA CCCGGTGGAA GTGACCATCG CGGCCAAGAC CACCACCTCG GCCAACATCC GCCAGCGCTA CTGGTGGGTG AGCGGCATGC ACAAGCTGGA CGCGCTGACC CGCATCCTGG AAGTCGAGCC GTTCGACGCG ATGATCATTT TCGCGCGCAC CAAGGCCGGT ACCGAGGAAC TGGCCAGCAA GCTGCAGGCC CGTGGCCTGG CCGCTGCCGC CATCAACGGT GACATGCAGC AGGCGCAGCG TGAGCGCACC ATCGCCATGC TGAAGGAAGG CAAGCTGGAT ATCCTGGTCG CCACCGACGT GGCTGCCCGC GGCCTGGACG TGGAACGCAT CAGCCACGTG CTGAACTACG ACATCCCGTA CGACACCGAA AGCTACGTGC ACCGCATCGG CCGTACTGGC CGTGCCGGCC GCAGCGGCGA GGCGATCCTG TTCGCCACCC CGCGCGAGAA GGGCATGCTG CGCCAGATCG AGCGTGCTAC CCGCCAGCCG ATCGAAGAAA TGCAGCTGCC GAGCGTGGAA GCGGTCAACG ACAACCGCAT CAACAAGTTC ACCTCGCGCA TCACCGAGAC CCTCGGCCAG GGCGGCCTGG ACTTCTACCG CCAGCTGTTG GAACGCTTCG AGACCGAGCA GAACGTGCCG GCCATCGAAG TGGCTGCTGC GCTGGCGAAG ATGATGCAGG GCGATACCCC GTTCCTGCTG CAGCCGCCGG TGCGTGCACC GCGCGAAGAA CGTGCGCCGC GTGAGCGTTT CGAGCGCACT GAGCGCCCGG AACGTGGCGA TCGCAACGAG CGTGGTCCGC GCTTCGAGCG TGGCCCGCGT CGTGACGATG CCGAGGGTGG CTTCGAGCAG CGCCCGCGCC GTGATGTGCC GCCGCGCGGT GCACCGGAGC AGGGCATGGA GACCTACCGC ATTTCGGTCG GCCACCAGCA CGGCGTGAAG CCGGCCAACA TCGTCGGCGC CATCGCCAAC GAGGCCGGCC TGGAAAGCCG TTTCATCGGC CGCATCGACA TTCACGATGA CTTCTCGCTG CTGGACCTGC CGGCGCAGAT GCCGTCGGAC GTGCTGACCC ACCTGCAGAA GGTGTGGGTC TCCGGCCAGC AGCTGCAGAT GCGTCCGCTG GCGGCTGGTG AAGAGATCAA CCCGGCGCCG CGTCCGTTCA AGCCGCGCTT CGACAAGCGT GGTCCGGGTG GTCCGGGTGG CCCGCGCCGC AGTGGCCCGG GTGGCCCTGG TGGCGACCGC GGTGGTGACC GCGGTGGTGA CCGCGACAGC CGCCCGCCGC GTCGTGACGG CTTCAAGCCG CGCGGCCCGC GCAGCTACTA A
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Protein sequence | MSQESQAQLQ FAQLGLSESV MQAVTAIGYE TPSPIQAATI PAMLEGRDVL GQAQTGTGKT AAFALPVLSN IDLQQIKPQA LVLAPTRELA IQVAEAFQSY SSKIPGFRVL PVYGGQPYGQ QLSALRRGVH IVVGTPGRVI DHLDRSTLDL SELKTLVLDE ADEMLRMGFI DDVEAVLKKL PAKRQVALFS ATMPPQIRRI AQTYLQDPVE VTIAAKTTTS ANIRQRYWWV SGMHKLDALT RILEVEPFDA MIIFARTKAG TEELASKLQA RGLAAAAING DMQQAQRERT IAMLKEGKLD ILVATDVAAR GLDVERISHV LNYDIPYDTE SYVHRIGRTG RAGRSGEAIL FATPREKGML RQIERATRQP IEEMQLPSVE AVNDNRINKF TSRITETLGQ GGLDFYRQLL ERFETEQNVP AIEVAAALAK MMQGDTPFLL QPPVRAPREE RAPRERFERT ERPERGDRNE RGPRFERGPR RDDAEGGFEQ RPRRDVPPRG APEQGMETYR ISVGHQHGVK PANIVGAIAN EAGLESRFIG RIDIHDDFSL LDLPAQMPSD VLTHLQKVWV SGQQLQMRPL AAGEEINPAP RPFKPRFDKR GPGGPGGPRR SGPGGPGGDR GGDRGGDRDS RPPRRDGFKP RGPRSY
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