Gene Smal_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1206 
Symbol 
ID6475058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1370586 
End bp1371905 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID642730371 
Producthypothetical protein 
Protein accessionYP_002027594 
Protein GI194364984 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0364566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.012597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCC TGAAGATGCT GCTGCGGTTC GCCATTGTCG GCGGGCTGAT CCTGCTGCTG 
CTGATCCCGC TGATGATGAT CCGCGGGGTC ATCAACGAGC GCAGCCAGTA CCGCGATGAG
GCCTTTGCAC GGGTGGCCGA CAGCCGCGCC GGCGTGCAGC GCCTGGTGGG GCCGGTGCGT
GTGGTGCCGT GGGTGGAACG CAAGGAAGTT GAACTGGTCG ACTCGCTGGG CGTCAAGAAG
ACCGAAGTGC AGGTCACCGA GGGCCATTGG CTGCAGATGC CGGCGTCGCT GGATGTCGGT
GGCGAGATGC TGCCGAGCCA GCGCGAGGTG GGCCTGTTCA AGGTGCCGGT GTACAGCTGG
AACGGCCAGT TGAAGGCCAC CTTCGCCGCT GACGACTATC CGGTGAAGGC CGGCCGCAGC
TATGGCCAGC CGTACGTGGC GCTGGGCATT TCCGATGTGC GTGGCCTGGT TGGCACACCG
AACCTGCGCG TGGATGGCAA GCAGCTGCGC CTGTTGCCGG GCGTTGGTGC GGCCAGCGAG
GTCGGTCGTG GCCTGCATGC ACCGGTGGCC GGTTTCGCCG AGGATCAGGG CGGCACCCTG
GCCGGCAGTA CGGTTGAACT GGAGCTGCGC CTGGACGGCA GCCGCATGCT GTCGGTGGTG
CCGGTGGGCG ATGACACCAA GATCGCATTG CGCTCCAGCT GGCCGCACCC GTCGTTCAGC
GGTGCGTTCC TGCCCAACGA GCGTCGCGTC GACGCACAGG GCTTCGACGC ACGCTGGGCG
GTGTCCTCGC TGGCCTCCGA TGCCCAGCGG CAGCTGCGCA GCGACGGTGC GATCGATTCG
CAGGCGGTGA CGGTGTCGCT GGTCGATCCG GTCGATGCCT ATACCCAGGC CGATCGTGCT
TCCAAGTACG GCGTGCTGTT CGTGGTGCTG ACCTTCGTCG GCTTCATCCT GTTCGAGCTG
ATCAAGTCGC TGCGCATCCA TCCGCTGCAG TACCTGATGG TCGGCCTCGC ACTGGCGATC
TTCTTCCTGC TGCTGATCAG CCTGTCCGAG CACATCGCCT TCTGGAAGGC GTACCTGGTA
TCGGCGGTGG CCTGTATCGG CCTGCAGGCG GTGTACCTGG CCAACGTGTT GGGTCACTGG
AAGCGCGGCC TGGGCTTCGC TGCGCTGCTG ACTGTGTTGT ATGGCGCGCT GTATGGCCTG
CTGGTATCGG AAAACAACGC GCTGCTGATG GGCTCGCTGC TGCTGTTCGT GATCCTGGCG
CTGGCGATGT GGGTGACCCG CCGGGTCGAC TGGTACGCGC TCGGCGCGGA CCTGAAGTAA
 
Protein sequence
MKSLKMLLRF AIVGGLILLL LIPLMMIRGV INERSQYRDE AFARVADSRA GVQRLVGPVR 
VVPWVERKEV ELVDSLGVKK TEVQVTEGHW LQMPASLDVG GEMLPSQREV GLFKVPVYSW
NGQLKATFAA DDYPVKAGRS YGQPYVALGI SDVRGLVGTP NLRVDGKQLR LLPGVGAASE
VGRGLHAPVA GFAEDQGGTL AGSTVELELR LDGSRMLSVV PVGDDTKIAL RSSWPHPSFS
GAFLPNERRV DAQGFDARWA VSSLASDAQR QLRSDGAIDS QAVTVSLVDP VDAYTQADRA
SKYGVLFVVL TFVGFILFEL IKSLRIHPLQ YLMVGLALAI FFLLLISLSE HIAFWKAYLV
SAVACIGLQA VYLANVLGHW KRGLGFAALL TVLYGALYGL LVSENNALLM GSLLLFVILA
LAMWVTRRVD WYALGADLK