Gene Smal_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1203 
Symbol 
ID6475055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1367419 
End bp1368276 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID642730368 
Productprotein of unknown function DUF519 
Protein accessionYP_002027591 
Protein GI194364981 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.478331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.221337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC GCCACGCCTT CCATGCCGGC AACCACGCCG ATGTGCTCAA GCACATCGTG 
CAGCTGGCCC TGATCGACAG CTTCAAGCGC AAGGACAGCC CGTTCTTCGT GCTCGACACC
CACGGCGGTG CCGGCCGCTA CCTGCTGGCC AGCGAAGAGA GCCGCAAGAC CCTGGAGGCC
GAGTCCGGGA TCATGCGGCT GATGGCCCAG CCCAAGCTGC CGGAGGTGGT CGAGCGCTAC
CTGAAGGCGG TACAGGCCGG CAATCCGGTC GGCGCGATGA CCAATTATCC GGGCTCGCCG
CTGCTGAGCG CGCAGGCGAT GCGCGCACAG GACCGCATGG CGGTCTGTGA GCTGCAGGAA
GCCGAAACGG CCACGCTGAA AGCGCTGTTC GCCCATGACA GCCGGGTCGG CGTGCATCCC
GGCGACGGTT ACGCGCTGCT GCGCTCGCTG CTGCCGCCGA AGTTCAACGG CAGCAAGATC
GGCCGCGGCC TGGTGCTGAT CGATCCGCCC TACGAAGCCC AGGATGCCGA ATATCAGGCG
GTCCTGGCCG CCCTGGCCGA GACCCTGGCG CGCTGGCCGC AGGCCACCTG TGCGGTCTGG
TTCCCGATCA AGCAGCGCCG CACCATCCTG CATTTCCTGC GCAAGGCCAG CGCGCTGCCG
GTGAAATCGG CGATGACGAT CGAATTCCTG GTGCGCCCGG ACGACTCGCC GCTGCGCCTC
AACGGCAGTG GCATGTTGCT GCTCAACCCA CCCTGGCAGT TCGACCGGGT GGTCGGCCCG
GCCCTGCCGG CGCTGCGCCA GCACCTGGGC GAGCCCGGCG CCAGCACCCG CCTGGATTGG
CTCAAAGCAC CCGAATAA
 
Protein sequence
MNYRHAFHAG NHADVLKHIV QLALIDSFKR KDSPFFVLDT HGGAGRYLLA SEESRKTLEA 
ESGIMRLMAQ PKLPEVVERY LKAVQAGNPV GAMTNYPGSP LLSAQAMRAQ DRMAVCELQE
AETATLKALF AHDSRVGVHP GDGYALLRSL LPPKFNGSKI GRGLVLIDPP YEAQDAEYQA
VLAALAETLA RWPQATCAVW FPIKQRRTIL HFLRKASALP VKSAMTIEFL VRPDDSPLRL
NGSGMLLLNP PWQFDRVVGP ALPALRQHLG EPGASTRLDW LKAPE