Gene Smal_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1196 
Symbol 
ID6475048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1357522 
End bp1358502 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID642730361 
Productcation diffusion facilitator family transporter 
Protein accessionYP_002027584 
Protein GI194364974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.114985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCACG ACCACGATCA CCTGCCATCC GAGATCCGCC ACGAGAAACC CTTGTGGTGG 
GCGCTCGGCC TGACCTCCAC CTTCCTCGTT GTCGAGGTGG TGGGCGCGTT CTGGACCAAC
AGCCTGGCGC TGCTGTCCGA CGCCGCGCAC ATGGCCACCG ATGCGCTGGC GCTGATGATC
GCGCTGGTCG CGGTGCGGCT GAGCCGGCGC CCACCGGATG CGCGCCGCAC CTACGGCTAT
GCGCGCCTGG AAGCGCTGGG CGCGATGATC AATGGCGCGA TGCTGTTCGT GGTCGCCGGC
TACATCCTGT GGGAGGCCAT TGGGCGTTTC CGCGAGCCGC AGGAGATTGC CTCGTCGGGC
ATGCTGGTGA TTGCCGCGGC GGGCCTGGTC ATCAATCTGA TCTCGATGCG CCTGCTGCAG
GCCGGCAGCG GCGAGAGCCT CAACGTGAAG GGTGCCTACC TGGAAGTGTG GGCAGACATG
CTCGGCTCGG TGGCCGTGAT TGCTGGCGCG CTGTTGATCA AGTGGACCGG CTGGAAGCCG
ATCGACCCGA TCCTGGCAGT GCTGATCGGC CTGTGGGTAC TGCCGCGCAC CTATGTGCTG
ATGCGCGAGG CGATCAACGT GCTGCTGGAA GGCGTGCCCA AGGGCATGGA CGTGGCCAAG
GTGCGCGACA GCCTGTCCGG CCACGCTGCG GTAATGGACG TGCATGACCT GCATGTGTGG
GCGCTGGCCT CCAGCACCCC GGCGCTGACC GCGCACATCG TGATGCGTGA TGGCACCGAC
GCTGATTCAC TGCGTCGAGA GCTGGGTGGC CGCCTGCACG ATGACTTCGG TATCGAGCAC
GTGACGCTGC AGATCGAGGC GGATCATTGC GGTGAAGCCT GTGGCGAGCC GGCGCCGGCC
AAGGGCGGTG AGCACGAGGG CCATGAAGGC CATGACCACG GCGAGGACGC GCAGGGCCAC
CGCGGCCACG TGCATCGCTG A
 
Protein sequence
MGHDHDHLPS EIRHEKPLWW ALGLTSTFLV VEVVGAFWTN SLALLSDAAH MATDALALMI 
ALVAVRLSRR PPDARRTYGY ARLEALGAMI NGAMLFVVAG YILWEAIGRF REPQEIASSG
MLVIAAAGLV INLISMRLLQ AGSGESLNVK GAYLEVWADM LGSVAVIAGA LLIKWTGWKP
IDPILAVLIG LWVLPRTYVL MREAINVLLE GVPKGMDVAK VRDSLSGHAA VMDVHDLHVW
ALASSTPALT AHIVMRDGTD ADSLRRELGG RLHDDFGIEH VTLQIEADHC GEACGEPAPA
KGGEHEGHEG HDHGEDAQGH RGHVHR