| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1194 |
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| Symbol | |
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| ID | 6475046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1353348 |
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| End bp | 1354763 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730359 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002027582 |
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| Protein GI | 194364972 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.361877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.129887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCAC CCCAGTTGGA CGACGCCAGC CAGCCGCTGG CCGAGGCCTG GCAGCAGTGC
CTGCTGCAGG CCGGCCCTGC CGCCACCGCG CTGCTGCATG CCGCGGCCGC CGATGCCCCA
CCGGCCCTGG CCCAACGCTT CTACGAAGTG CTGCTGCAGG ACACCCGTGC GCGCCGTTTC
CTGTCCCACG ACCAGGTCAA GCAACGCCTG CAGCCGGCCA TGCAGCGCTG GTTGGCGCAG
CTGCTGACCA CCGATGCCAG CGGCATCGCC AACACGGTGG CCTCGCAACG AATCATCGGC
GACGTGCACG CCCGCGTCGG CATTCCGGTC GACCTGGTTA CCCGCGGTGC GCGCGTGCTC
AAGCACGAAC TGTTCGTGCG CCTGCGTGAC GATGCACCGG ACAGCGACAC CGCATTCGCC
GCCATCGACT GCCTCAGCGC GATCATGGAT ATCGCCATGG AAGGCATGAC CCTGGCCTAC
ACCCATGCGC GCGAGCGCTC CACCCGTGCC GACGCCGCCT ACCGGCTGTT CTCGCTGGTA
CAGAACGTCG GTACCGAACG CGAGCGCCAG CGCGCACTGC TACTGGACTG GGAAAACGCC
CTGCTCTACG CATTGGCCGG TCACGTGCAG GCCAGCGACA ACGCCAGCCT GGCTACCTCG
GAGTTCGGCC TGTGGTTCAC TCATAAGGGC ATCCCCAGCT TCGGCGAAAG CAGCGAAACG
CAGCAGGTGG GCCAGTTGAT GGCCCGCATT GATGGCCACC TGCAGCGCGC GAGCGGCGAT
GCTCCGGCGC AGCGACTGGC GGTGCTGCCG GCCATCCGCG AGGACCTGGC CGCGATCCGC
ACCTTGATGA CACTGCTGTT CGAGCGCATC GGCGAACTGG ATGCCGGCAG CGACGCGCTG
ACCAACCTGC TCAACCGTCG CTTCCTGCCT ACCGTGCTGC GCCGGGAGAT CGAGCTGGCC
ACACGCAACC GCACACCGTT CTCGCTGCTG CTGCTCGACC TGGATCATTT CAAGGCGATC
AACGATGGCC ACGGCCACGA TGCCGGTGAC CGCGCCCTGC AGCACGTGGC CGGGGTGCTC
GGCCAGCTCA CCCGTGGCAG CGATTATCTG TTCCGCTACG GTGGCGAGGA ATTCGTGGTG
GTGCTGGTCG CCGCCAGCGA ATCACAGGCG GCAGTGATTG CTGAAAGCCT GCGCCGGCAG
ATCGCAAAAT CGCCGGTGCC GCTGGCCAAC GGCCAGGTAT TGAGCCTGAC CGCCAGCATC
GGTGTCGCCG GCCATGACGG TCATCCGGAC TACGAGCGGC TGATGGCCCG TGCCGACGCG
GCGATGTACG AGGCCAAGCG CAGCGGTCGC AACCGCGTGG TGGTGGCCAG TGCGGACCTG
CAGGAAGCCC CGGGACGGCG TGCATTGCAG CGGTAG
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| Protein sequence | MEPPQLDDAS QPLAEAWQQC LLQAGPAATA LLHAAAADAP PALAQRFYEV LLQDTRARRF
LSHDQVKQRL QPAMQRWLAQ LLTTDASGIA NTVASQRIIG DVHARVGIPV DLVTRGARVL
KHELFVRLRD DAPDSDTAFA AIDCLSAIMD IAMEGMTLAY THARERSTRA DAAYRLFSLV
QNVGTERERQ RALLLDWENA LLYALAGHVQ ASDNASLATS EFGLWFTHKG IPSFGESSET
QQVGQLMARI DGHLQRASGD APAQRLAVLP AIREDLAAIR TLMTLLFERI GELDAGSDAL
TNLLNRRFLP TVLRREIELA TRNRTPFSLL LLDLDHFKAI NDGHGHDAGD RALQHVAGVL
GQLTRGSDYL FRYGGEEFVV VLVAASESQA AVIAESLRRQ IAKSPVPLAN GQVLSLTASI
GVAGHDGHPD YERLMARADA AMYEAKRSGR NRVVVASADL QEAPGRRALQ R
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