Gene Smal_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1193 
Symbol 
ID6475045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1352139 
End bp1353323 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID642730358 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002027581 
Protein GI194364971 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.754311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.247806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAG CACCCCTCCC ACGCCCCCTG CTGGCCCTGC TCGCGGTTGC CGCAGGTGCC 
AGCGTTGCCA ACGTCTATTA CGCACAGCCA TTGCTGGAAC GCCTGGCACA GGCCTTTGCG
CTGGACCCCG CGCTGGCCGG GGCGGTACTG GCAGCGACCC AGGCGGGCAG CGTGCTGGCC
TTGCTGGGCC TGCTGCCATT GGCCGACAGG GGCGATCGCC GGCGACTGCT GCGCCTGCAG
CTGCTGGCGC TGGTGGTCGC ATTGCTGTGG TTGGCGGCCG CGCGAACGGC CATGTGGCTG
TTGTCGGGCA TGCTGCTGGC CGGCCTGCTG GGCACCGCGT TGACCCAGGG ATTGATCGCC
TACACCGCAT CGCTGGCAGC GGCTGAGCAG CGCGGGCGCG TGGTTGGCCT GGTGCAGGGC
GGTGTGTTCA TTGGCCTGCT GCTGGCGCGT GTAGTGTCCG GCGTGGTGGC GGCCGCCGTT
GGCTGGCGCG CGGTCTATCT GCTGTCGGCA GCGCTGATGG CCGCATTGGC GCTGCTGCTG
TGGCGGCGTC TGCCGGCGGT GCCGGTACCG GTGGTGCCAC CGGGCTGGCG TGCCTTGATG
GGGTCGATGC TGGGCATGCT GCGCGATGAC CGGACGCTGC GTGAGCGCGG TCCGTTGGCG
CTGTTGTTGT TTGCCGGCCT CAATGTGTTC TGGGCGGCAG CGCCGCTGCC GTTGTCGGCG
CCACCGCTGC ACTGGTCGAC CGCCGCCATC GGTGCGCTGG GCCTGGCTGG CGTGATCGGT
GCGCTGCTGG CAGCGCGGGT AGGGCACTGG ATGGACCGTG GATTCGCGCA TCGGGTCAGC
CTCGGCGCGC TGCTGCTGAT GCTGGTCGCG TGGTGGCCGC TGCTGGGGTT GCCGCATTCG
GTGGGCATGT TGTTGCTGGG CGTGGTCGTG CTCGATCTGG GTGGGCAGGC GCTGCATGTA
TCGAACCAGG CCCTGCTGCT GCGCGCGCCG GGCGAACAGC ATGGACGCAT GGTGGCGCTG
TACATGCTGT TCTATGCGCT GGGCAGCGGT GCCGGCGCAG CGGCGGGCAC ATGGATGCAG
GCGCGCCATG GCTGGCCTGC GGTATGCCTG CTGGGCGCCG GCATCGCATT GCTGGCGCTG
CTGTGGTGGG CGGCGTGGCG GGTACCGCGC CGTGCCGCAA CGTAG
 
Protein sequence
MSAAPLPRPL LALLAVAAGA SVANVYYAQP LLERLAQAFA LDPALAGAVL AATQAGSVLA 
LLGLLPLADR GDRRRLLRLQ LLALVVALLW LAAARTAMWL LSGMLLAGLL GTALTQGLIA
YTASLAAAEQ RGRVVGLVQG GVFIGLLLAR VVSGVVAAAV GWRAVYLLSA ALMAALALLL
WRRLPAVPVP VVPPGWRALM GSMLGMLRDD RTLRERGPLA LLLFAGLNVF WAAAPLPLSA
PPLHWSTAAI GALGLAGVIG ALLAARVGHW MDRGFAHRVS LGALLLMLVA WWPLLGLPHS
VGMLLLGVVV LDLGGQALHV SNQALLLRAP GEQHGRMVAL YMLFYALGSG AGAAAGTWMQ
ARHGWPAVCL LGAGIALLAL LWWAAWRVPR RAAT