Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1193 |
Symbol | |
ID | 6475045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1352139 |
End bp | 1353323 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642730358 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002027581 |
Protein GI | 194364971 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.754311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.247806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCAG CACCCCTCCC ACGCCCCCTG CTGGCCCTGC TCGCGGTTGC CGCAGGTGCC AGCGTTGCCA ACGTCTATTA CGCACAGCCA TTGCTGGAAC GCCTGGCACA GGCCTTTGCG CTGGACCCCG CGCTGGCCGG GGCGGTACTG GCAGCGACCC AGGCGGGCAG CGTGCTGGCC TTGCTGGGCC TGCTGCCATT GGCCGACAGG GGCGATCGCC GGCGACTGCT GCGCCTGCAG CTGCTGGCGC TGGTGGTCGC ATTGCTGTGG TTGGCGGCCG CGCGAACGGC CATGTGGCTG TTGTCGGGCA TGCTGCTGGC CGGCCTGCTG GGCACCGCGT TGACCCAGGG ATTGATCGCC TACACCGCAT CGCTGGCAGC GGCTGAGCAG CGCGGGCGCG TGGTTGGCCT GGTGCAGGGC GGTGTGTTCA TTGGCCTGCT GCTGGCGCGT GTAGTGTCCG GCGTGGTGGC GGCCGCCGTT GGCTGGCGCG CGGTCTATCT GCTGTCGGCA GCGCTGATGG CCGCATTGGC GCTGCTGCTG TGGCGGCGTC TGCCGGCGGT GCCGGTACCG GTGGTGCCAC CGGGCTGGCG TGCCTTGATG GGGTCGATGC TGGGCATGCT GCGCGATGAC CGGACGCTGC GTGAGCGCGG TCCGTTGGCG CTGTTGTTGT TTGCCGGCCT CAATGTGTTC TGGGCGGCAG CGCCGCTGCC GTTGTCGGCG CCACCGCTGC ACTGGTCGAC CGCCGCCATC GGTGCGCTGG GCCTGGCTGG CGTGATCGGT GCGCTGCTGG CAGCGCGGGT AGGGCACTGG ATGGACCGTG GATTCGCGCA TCGGGTCAGC CTCGGCGCGC TGCTGCTGAT GCTGGTCGCG TGGTGGCCGC TGCTGGGGTT GCCGCATTCG GTGGGCATGT TGTTGCTGGG CGTGGTCGTG CTCGATCTGG GTGGGCAGGC GCTGCATGTA TCGAACCAGG CCCTGCTGCT GCGCGCGCCG GGCGAACAGC ATGGACGCAT GGTGGCGCTG TACATGCTGT TCTATGCGCT GGGCAGCGGT GCCGGCGCAG CGGCGGGCAC ATGGATGCAG GCGCGCCATG GCTGGCCTGC GGTATGCCTG CTGGGCGCCG GCATCGCATT GCTGGCGCTG CTGTGGTGGG CGGCGTGGCG GGTACCGCGC CGTGCCGCAA CGTAG
|
Protein sequence | MSAAPLPRPL LALLAVAAGA SVANVYYAQP LLERLAQAFA LDPALAGAVL AATQAGSVLA LLGLLPLADR GDRRRLLRLQ LLALVVALLW LAAARTAMWL LSGMLLAGLL GTALTQGLIA YTASLAAAEQ RGRVVGLVQG GVFIGLLLAR VVSGVVAAAV GWRAVYLLSA ALMAALALLL WRRLPAVPVP VVPPGWRALM GSMLGMLRDD RTLRERGPLA LLLFAGLNVF WAAAPLPLSA PPLHWSTAAI GALGLAGVIG ALLAARVGHW MDRGFAHRVS LGALLLMLVA WWPLLGLPHS VGMLLLGVVV LDLGGQALHV SNQALLLRAP GEQHGRMVAL YMLFYALGSG AGAAAGTWMQ ARHGWPAVCL LGAGIALLAL LWWAAWRVPR RAAT
|
| |