Gene Smal_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1189 
Symbol 
ID6475041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1348219 
End bp1349598 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content68% 
IMG OID642730354 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002027577 
Protein GI194364967 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.409159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGTG GCCCGCCCAG CCTGCGCCGG CGCCTGCTCG CCTTCCTGGC GCTGCCGATG 
CTGGGCCTGT TGATCTTCAA CACGGTCCTT GCCTATTACG TTGCGCTGGA CTATTCCAAT
CGCATCCACG ACCGCAACCT GATCGACGAC ACGCATTCGT TCGCCCAGAT GCTGAGCACC
ATGCCGGTGA CCAGCGACCT GTCACCACAG GCGCGCTTCC TGATCGAGTA CGACCCGGAC
GGCCATCGCT ATTTCAACGT CGACAGCAGC CGCAAGGGCA CCCTCAGCGG CAACGCCGAC
TTCAGCCCGT ATGCACCTTC GCAGGACTGC ACCGGCGTGC ATCCGGCGCT GTACGACGGC
ACCCTCAACG GCCAGCAGGT GCGCATGGCC ACCGTCTGCA CGCAGGCGAT GAACGACCCG
CAGGACCAGC TGGCGGTGAC CGTGGCCGAG AGCATGGCCG ACCGCCGACA GCGTGCGCGC
GAGATCCTGA TGATCATCAT CCCGCTGATG ACCATGCTGG CGCTGGGCAC GGCTGCGCTG
GTCTGGTTCG GCGTGACCTA TGGCCTGCGC ATCCTGACCC CGCTGACCAC CCGCCTGGCG
CAGCGCCGTG GCGAGCTGGC GCCGATCTCC GATGCCGACG TGCCGGAAGA GATCCAACCG
CTGATCAGCA CCATCGATGG CCTGTTCGCC CGCCAGGCGG AAATGATCAC GCTGCAGAAC
CGCTTCATTG CCGATGCCGC GCACCAGTTG CGCTCGCCTT TGGCCGGCAT GGCCCTGCAT
GTGGACCAGG CGCTGGCACA TGGCGACCCG GACACCGTGC GCGAGGCGCT GCAGCACATC
CGCCGGCTCA ACCAGCGCAC CGCGCGGGTC AGCACCCAGC TGCTGGCGCT GAGCCGCGCG
CAGACCGTGC CGGAAACCGT CGAAGCGCTG GATCTTGGCA CCCTGCTGCC GCAATGGGTG
GGCACCCGCG TGCCCGAAGC GATCCGCGAT GGCATCGACC TCGGCTACCG CGGCAGCAGC
CAGCCGCTGC GTGTGCTCGG CAACGGCGCC CTGCTGCAGG AGGCGCTGGA CAACCTGATC
GACAATGCCC TGCGCTATGC AGGCCGCGGC GCCACCGTCA CGGTCGGCGT GCAGGCGCTG
GACGACAATG ATGTGGAGCT GTACGTGGAG GACAACGGCC CGGGCGTGCC CGAGGACGTG
ATGCCACGGC TGGGCGAGCG TTTCTTCCGC GCCCCGGGCA CCACGGCCAG TGGCACCGGC
CTGGGCCTGG CCATCGCCCA CGAGGCCGTG GAGCACTTCG GTGGACGCCT GGGCTTCCTC
AACCGTGCCG GCGGCGGACT GAAGGTCACC ATCACGCTGC CGCTGCTGAA GGCCCCCTGA
 
Protein sequence
MISGPPSLRR RLLAFLALPM LGLLIFNTVL AYYVALDYSN RIHDRNLIDD THSFAQMLST 
MPVTSDLSPQ ARFLIEYDPD GHRYFNVDSS RKGTLSGNAD FSPYAPSQDC TGVHPALYDG
TLNGQQVRMA TVCTQAMNDP QDQLAVTVAE SMADRRQRAR EILMIIIPLM TMLALGTAAL
VWFGVTYGLR ILTPLTTRLA QRRGELAPIS DADVPEEIQP LISTIDGLFA RQAEMITLQN
RFIADAAHQL RSPLAGMALH VDQALAHGDP DTVREALQHI RRLNQRTARV STQLLALSRA
QTVPETVEAL DLGTLLPQWV GTRVPEAIRD GIDLGYRGSS QPLRVLGNGA LLQEALDNLI
DNALRYAGRG ATVTVGVQAL DDNDVELYVE DNGPGVPEDV MPRLGERFFR APGTTASGTG
LGLAIAHEAV EHFGGRLGFL NRAGGGLKVT ITLPLLKAP