Gene Smal_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1185 
Symbol 
ID6475037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1345333 
End bp1346535 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID642730350 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002027573 
Protein GI194364963 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.525026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT TCGCGCGCGA GCTGCCGCCC ACTGCTGGCC TGCCAATGCA GGCCAGCGAC 
TTCCTTCCCG GCGGTGGCGA CCTGCGCGAG ATCCTGGCCA GCCAACTGGG TACCCCGCCG
CTGCAGCTGA CCTGCTCCGG CACCCACGCG CTGCTGATCG CGCTGCGTAC GCTGCGCAGG
CGCGCGCCCA GGCGCGACAC CGTGATCATG CCGGCCTATA CCTGCCCACT GGTACCGATC
GCGGTGCACA GCCTGGGCCT GCGCGTGCAG TTGTGCGATA CCCGGCGCGG TCATTTCGAC
TTCGATCCGG GCCAGCTCAA GCGGCTGGCC GATGCGCGCA CGCTTGCGAT CCTACCTACC
CACCTGGGCG GGCGCATTGC CGATGTCGAG CTGGCCTGCG AAGTCGCCCG CAACGCTGGC
GCCTGGGTGA TCGAAGATGC CGCGCAGGCA CTCGGCGCAC GGGTCGGCAA CAGCAGTGTC
GGCCTGCGTG GCGATATCGG ATTCTTCAGC CTGGCCGCCG GCAAGGGCCT GAGCCTGCAT
GAAGGCGGCC TGCTGGTCAG TCGTGACGAT GCGTTGCGCG CGGCACTGGC CGAGCATGCC
GCCGAGCAGA CGCGTTTCAA CCTTCGCTGG GAGCTGCTGC GCAGCGTGCA GCTGCTCGGC
CTGGCCGCCT GCTACCGCCC GTCGTTGCTG TCGCTGGTGT ATGGCAATCC GCTACGCCGT
GCGCTGCAGC GTGGCGATCT CGAAGAAGCG GTGGGTGACA TCTTCGCGCT GGATATCCCG
CAGCACCGGG TCAGCCGGTG GCGGCAGAAC ATCGGATCCC ACGCTGCGCG GCGCCTGCCT
GCCTTCCTGC AGGCCGGACG CCTGCGCGCC CTGCAACTGC GGGTGCAGTT GGCTCAACTG
CCGGCGGTGG AAGTGGTCGA TGGACTGGCT GGCACCGGCG GCACCTGGCC GATGCTGATG
CTGCTGCTGC CCAGCCAGCA GGCCCGCGAT GGCGTACTGA AAGACCTGTG GCCGCGCGGG
CTTGGGGTCA GCCGCATGTT CATCCATGCC CTGCCCGACT ACACCTACCT GCGCGGCATC
GTGCCGGATG ACCCGACGCC CAACGCACGC GACTTCGCCG CACGCATGCT GACGCTCGGC
AACAGTGCCT GGCAGACCCG TGAAGACACC GCCGAAATCC TGCAGGCGCT GGCGCGGGCC
TGA
 
Protein sequence
MSLFARELPP TAGLPMQASD FLPGGGDLRE ILASQLGTPP LQLTCSGTHA LLIALRTLRR 
RAPRRDTVIM PAYTCPLVPI AVHSLGLRVQ LCDTRRGHFD FDPGQLKRLA DARTLAILPT
HLGGRIADVE LACEVARNAG AWVIEDAAQA LGARVGNSSV GLRGDIGFFS LAAGKGLSLH
EGGLLVSRDD ALRAALAEHA AEQTRFNLRW ELLRSVQLLG LAACYRPSLL SLVYGNPLRR
ALQRGDLEEA VGDIFALDIP QHRVSRWRQN IGSHAARRLP AFLQAGRLRA LQLRVQLAQL
PAVEVVDGLA GTGGTWPMLM LLLPSQQARD GVLKDLWPRG LGVSRMFIHA LPDYTYLRGI
VPDDPTPNAR DFAARMLTLG NSAWQTREDT AEILQALARA