Gene Smal_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1162 
Symbol 
ID6475014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1320933 
End bp1321340 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID642730327 
ProductRNA-binding S4 domain protein 
Protein accessionYP_002027550 
Protein GI194364940 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC TTTCCCCGTT GTCGCCCAGT GTCCGCCTGG ACATCTGGTT GTGGGCGGCC 
CGTTTCTTCA AGACCCGCAG CCTGGCCAAG CAGGCCATCG AGACCGGCAA GGTCAGCGTG
GCCGGGCAGC GCCCGAAGTC CTCGCGCGCG GTGCGCGTGG GTGAGCAGCT GCAGGTCGAC
CGCGGCGAGG AGCATTTCGA GATCCAGGTG CTGGGCCTGA GCGACCAGCG CGGGCCGGCG
CCAACGGCAC AGCAGCTGTA TGCCGAGAGC GAGGCTTCGA AGGCGCGCCG TGCCGAACAG
CGTGCACTGC GCATTGCGGC ACGCGATGGT TTCCAGCCGC CGGAACACAA GCCGGACAAG
CGCGCGCGGC GTTTGATCCG GGCGTTGGGT GACATCGACG CGCTCTAG
 
Protein sequence
MPELSPLSPS VRLDIWLWAA RFFKTRSLAK QAIETGKVSV AGQRPKSSRA VRVGEQLQVD 
RGEEHFEIQV LGLSDQRGPA PTAQQLYAES EASKARRAEQ RALRIAARDG FQPPEHKPDK
RARRLIRALG DIDAL