| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1144 |
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| Symbol | |
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| ID | 6474996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1302420 |
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| End bp | 1304480 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730309 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002027532 |
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| Protein GI | 194364922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.871944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCA GTTACAGTCA GAGCCTGGTC ACCATCTCCC TGCTGGTGGC CATTCTTGCT
TCGTACACGG CGCTGGACAT GGCCGGCCGG CTGGCCACGG CCGAAGGTCG TGTGGCGCGC
TGGTGGCTGG CCGGTGGCGC GGCGGCGATG GGCCTGGGCA TCTGGTCGAT GCACTTCATC
GGCATGCTCG CCTTCGACCT GCCGATCCCG GTCGGCTACG ACCTCGGCAT CACCCTGTAC
TCGCTGGCGG TGTCGATCGG CGCCTCGGCC TACGCCCTAT GGCTGGTGTC GCGCCCCAGC
CTGCCGTGGC GGCGGCTGCT GGCCGGCGCG GTGCTGATGG GCCTGGGCAT CGCCACCATG
CACTACCTGG GCATGGCCGC GATGCGCATG CAGCCGGGTA TCGACTATCA CCCAGGCTGG
TTCGCCGCCT CGATCGCGGT CGCCATCGGT GCCGCCGGCG CCGCGCTATG GATCGCCTTC
CGGCTGCGGG CCGAGCAGCG CAACACGCTG CGCCTGCGCG CCCTGGCCTC GCTGGTGATG
GGCCTGGCCA TCGTCGGCAT GCATTACACC GGCATGGCCG CCGCACGTTT CCCTGAAGGC
AGCATCTGCG GCGCGGTCGG CAGTGGCGGC ATCGACACCC GCTGGCTGGC GGTGCTGGTG
ATCGTCACCA CCGTGGCCAC GCTGGGCATT GCTCTGGTCG CCTCACTGTT CGACCGGCAG
ATGCGCGTGC GCACCGGCCT GCTGGCCGAT TCGCTGGCGC ACGCCAACGA CAAGCTGATC
CAGGCCGCCC TGCATGACCC GTTGACCCAG CTGCCGAACC GCATGCTGCT GCAGGACCGC
ATCGAGCAGG CCATCGAGAA GGCGCGCCGT CGTGGCCGCG CGGTGGCGGT GATGTTCTGC
GACCTGGACG GCTTCAAGGC GGTCAACGAT GCCTACGGCC ACCAATTGGG CGACCGCCTG
CTGGTGGCGG TGGCACAGCG CATCGGCGGC CTGCTGCGGC CGCAGGACAC ATTCGCGCGC
CTCGGCGGCG ACGAGTTCGT GATCGTGCTG GCCATCGACA TCCCGGACGA CGCGGTGGTG
GTAGCCGAAC GCATCATCGC CGCCGCCGGC GAGCCGTTCA CACTGGATGC GGCCGAACTG
CAGGTCAGCG CCAGCCTCGG CATCGCCCTG TACCCGGATG ACGCCAGCAA CGAACGCGAA
CTGATGGCGC ACGCCGATGC GGCGATGTAC CACACCAAGG AAACCGGCCG GAACGGCTAT
ACCTTCTTCA CCCCGTCGAT GCAGCTCAGC GCCAACCGCC AGCTGCGCCT GCTGCAGGAC
CTGCGCAAGG CGATCGCGCG TGACGAGCTG CTGCTGCACT ACCAGCCGAA GTTCCCGGCC
GCTGGCGCAC CGGCTACCGG CGCCGAGGCG CTGCTGCGCT GGCAGCACCC GGAACTGGGC
CTGCTGGCGC CGGATGTGTT CATTCCCATC GCCGAGCGCA GCGGCCTGAT CCTGCCGATC
GGCGACTGGG TACTGGACCG CGCCTGTGCG CAGCTGCGGG CATGGCACGA GGCCGGGCAT
ACGGAATGGT CGATGGCGGT GAACCTGTCG CCGCTGCAGT TCGCCTCACC GGCGCTGCTG
GACAGCGTGC GCGAGGTGCT GCAACGGCAC CGGATCGAAC CGGCGCGACT GACCCTGGAA
ATCACCGAGA CCACGGCGAT GAAGGATGTC GACGCCAGCC TGGCGATCCT CAACGACCTG
ACCGCGATGG GCGTGCATAT CGCCATCGAC GATTTCGGCA CCGGCTACTC CAGCCTGCTG
TACCTGAAGC GGATGCCGGC TACCGAACTC AAGATCGACC GCGCATTCGT GCATGACCTG
GAACGCAACG ACGAAGACGC CGCCATCGTG TCGTCGATCA TCGCGCTGGG CCGCACCCTG
CAGCTGCAGG TGGTGGCCGA AGGCGTGGAG ACGCAGGCAC AGCGTGAGTA CCTGAGCGAA
CTGGGCTGTG ACCAGTTGCA GGGTTATCAC CTTGGCCGGC CTATGGATGC CGAAGAGTTC
CTGCGCCGGG TGGCGGGGTA G
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| Protein sequence | MTGSYSQSLV TISLLVAILA SYTALDMAGR LATAEGRVAR WWLAGGAAAM GLGIWSMHFI
GMLAFDLPIP VGYDLGITLY SLAVSIGASA YALWLVSRPS LPWRRLLAGA VLMGLGIATM
HYLGMAAMRM QPGIDYHPGW FAASIAVAIG AAGAALWIAF RLRAEQRNTL RLRALASLVM
GLAIVGMHYT GMAAARFPEG SICGAVGSGG IDTRWLAVLV IVTTVATLGI ALVASLFDRQ
MRVRTGLLAD SLAHANDKLI QAALHDPLTQ LPNRMLLQDR IEQAIEKARR RGRAVAVMFC
DLDGFKAVND AYGHQLGDRL LVAVAQRIGG LLRPQDTFAR LGGDEFVIVL AIDIPDDAVV
VAERIIAAAG EPFTLDAAEL QVSASLGIAL YPDDASNERE LMAHADAAMY HTKETGRNGY
TFFTPSMQLS ANRQLRLLQD LRKAIARDEL LLHYQPKFPA AGAPATGAEA LLRWQHPELG
LLAPDVFIPI AERSGLILPI GDWVLDRACA QLRAWHEAGH TEWSMAVNLS PLQFASPALL
DSVREVLQRH RIEPARLTLE ITETTAMKDV DASLAILNDL TAMGVHIAID DFGTGYSSLL
YLKRMPATEL KIDRAFVHDL ERNDEDAAIV SSIIALGRTL QLQVVAEGVE TQAQREYLSE
LGCDQLQGYH LGRPMDAEEF LRRVAG
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