Gene Smal_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1143 
Symbol 
ID6474995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1301961 
End bp1302302 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID642730308 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_002027531 
Protein GI194364921 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0245205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATG ACAACCATGC ACACGACCAT GCCGCTGGCG GCGAAAGCCA TGGCAGCGTG 
AAGTCGTACC TGATCGGCTT CGTGCTGGCG GTGGTGCTGA CCGTCATCCC GTTCTGGATG
GTGATGTCGG GCGACTTCTC GCGCACCGTC AACGGTGTGG TGATCGCGAT CACCGCGGTA
CTGCAGATGC TGGTCCACCT GGTGTTCTTC CTGCACCTGG ACCGCTCTTC GGAAAGCCGC
TGGAACGTCA ACGCTGCGGC CTTCACCGTG GTGGTGATCG GCATCATCGT GGTCGGTACC
CTGTGGGTCA TGCACAACAT GAACGTGCAC ATGATGCACT GA
 
Protein sequence
MAHDNHAHDH AAGGESHGSV KSYLIGFVLA VVLTVIPFWM VMSGDFSRTV NGVVIAITAV 
LQMLVHLVFF LHLDRSSESR WNVNAAAFTV VVIGIIVVGT LWVMHNMNVH MMH