Gene Smal_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1142 
Symbol 
ID6474994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1301323 
End bp1301961 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID642730307 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_002027530 
Protein GI194364920 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0473851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA ATACCTCGAC CCTGAGCCAC GGGCACGCCG CGCAAGCGGC GGCCCATGGC 
CATGACGACC ACGAGCACCA CGACACCGGC GGCAACACCG TCTTCGGTTT CTGGGTGTAC
CTGATGAGCG ACTGCCTCAT CTTCGCCTCG CTGTTCGCCA CCTATGTGGT GCTGGCCGGC
GGTACCGATG GTGGCCCGAC CGCGAAGGAC CTGTTCGAAC TGCCGTTCGT GGCATGGGAA
ACCGCGCTGC TGCTGACCTC CTCGCTGACC TTCGGCCTGG GCATGATTGC CATGCACCGC
AAGCAGATGG GTCAGATGTA CCTGTGGCTG GGCATCACCT GGCTGCTGGG CTTCGGCTTC
ATGTGCATGG AAGTGTGGGA ATTCCAGCAC CTGATCCATC AGGGCTATGG TCCGGACCGT
AGCGCCTTCC TGTCGGCGTT CTTCGCCCTG GTCGGTACCC ACGGCCTGCA CGTCAGCGCC
GGCCTGCTGT GGCTGCTGGT GATGTTCGTA CAGCTGAAGA AGTACGGCCT GACCCCGACC
AACAAGACCC GCATGGCGTG CCTGAGCCTG TTCTGGCACT TCCTGGACCT GATCTGGATC
GGCGTGTTCT CCGTCGTCTA CCTCAATGGA GCGCTGTAA
 
Protein sequence
MSTNTSTLSH GHAAQAAAHG HDDHEHHDTG GNTVFGFWVY LMSDCLIFAS LFATYVVLAG 
GTDGGPTAKD LFELPFVAWE TALLLTSSLT FGLGMIAMHR KQMGQMYLWL GITWLLGFGF
MCMEVWEFQH LIHQGYGPDR SAFLSAFFAL VGTHGLHVSA GLLWLLVMFV QLKKYGLTPT
NKTRMACLSL FWHFLDLIWI GVFSVVYLNG AL