| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1141 |
|---|
| Symbol | |
|---|
| ID | 6474993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1299329 |
|---|
| End bp | 1301326 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642730306 |
|---|
| Product | cytochrome o ubiquinol oxidase, subunit I |
|---|
| Protein accession | YP_002027529 |
|---|
| Protein GI | 194364919 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.115333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGTA AACTCTCAAT TGAGTCGATC CCCCACGATC CGATCGTCCT GACGACGTTG
ATCGGCGCAG TTCTGGGTGG CCTGGGCGTG ATGGCCCTGA TCACCAAGTT CAAGCTGTGG
GGCTATCTGT GGAAGGAGTG GTTCACCTCG GTGGATCACA AGAAGATCGG CGTGATGTAC
CTCATCGTCG CCTTCGTCAT GCTGCTGCGC GGTTTCTCCG ACGCCATCAT GATGCGTACC
CAGCAGGCGC TCGCCGTCGG CGGGTCCGAG GGTTACCTGC CGCCGCACCA CTACGACCAG
ATCTTCACCG CCCACGGCGT GATCATGATC TTCTTCGTGG CGATGCCGCT GATCACCGGC
CTGATGAACC TGGCCGTGCC GCTGCAGATC GGTGCGCGCG ACGTCGCGTT CCCGTTCGTC
AACTCGCTCA GCTTCTGGCT GTTCGTGTCC GGTGCGGTGC TGATCATGCT GTCGCTGTGG
ATCGGTGAGT TCGCTGCCAC CGGCTGGCTG GCGTTCCCGC CACTGTCGGG CATCGAATAC
AGTCCAAGCG TAGGCATGGA CTACTACATC TGGGGTCTAC AGGTCGCAGG CCTGGGTACC
ACGCTGAGCG GTATCAACTT CTTCATCACC ATCCTGAAGA TGCGTACCCC CAGCATGAAG
CTGATGCAGA TGCCGGTGTT CACCTGGACC GCCCTGGTGA CCAACGTGCT GATCGTCGCG
GCCTTCCCGG TGCTGACCAT CACCCTGGTG CTGCTGACCC TGGACCGTTA CCTGGGTACG
CACTTCTTCA CCAATGACGG TGGCGGCAAC GCCATGCTTT ACATCAACCT GATCTGGATC
TGGGGTCACC CGGAAGTCTA TATCCTGGTG CTGCCGGCGT TCGGTGTGTT CTCCGAAGTC
ATCGCGACCT TCTCGCGCAA GGCGCTGTTC GGCTACAAGG GCATGGTCTA CGCCACCGCC
TGCATCGGCG TGCTGTCGTT CATCGTGTGG CTGCACCACT TCTTCACCAT GGGTTCGGGT
GCCAACGTCA ATGCCTTCTT CGGCATCACG ACGATGATCA TCTCGATCCC GACCGGCGTG
AAGATCTTCA ACTGGCTGTT CACCATGTTC CGCGGTCGCG TGCAGTTCAC CACGCCCGTG
CTGTGGACCA TCGGCTTCAT GGTCACCTTC ACCATCGGCG GCATGACCGG CGTGATGCTG
GCGATCCCGG CCATCGACTT CGTGCTGCAC AACAGCCTGT TCCTGATCGC CCACTTCCAC
AACGTCATCA TCGGCGGCGT GGTGTTCGGC ATGTTCGCCG GCATCACCTA CTGGTGGCCG
AAGATGTTCG GCTTCCGCCT CAATGAGTTC TGGGGCAAGT GCGCGTTCTG GTGCTGGTTC
ATCGGCTTCT ACGTGACCTT CATGCCGATG TACGTGCTGG GCTTCATGGG CATGACCCGT
CGCCTGCAGA GCACCGTCAA CCCGGCCTAC GAGCCGCTGC TGCTGGTGGC TGCCGCAGGT
GCCTTCATCG TGGGTGCCGG CATCCTGTGC CAGATCATCC AGGTGGCCGT GTCGATCCGC
GACCGCAAGA AGACCGCCGA CCTGACCGGC GACCCGTGGG ATGCCCGTAC GCTGGAGTGG
GAAACCTCTT CGCCGCCGGC CTTCTACAAC TTCGGCAGCC TGCCGGAAGT CACCGAGCTG
GACGATTTCT GGGAGCGCAA GCAGCGTGGT GAAGCCTGGC CGAAGCCGGC CAAGTACACC
GACATCCACA TGCCGCGCAA CACCGGCACG GGCGTTGTCA TCGGTGCCTT CAGCCTGGTG
TTCGGCTTCG CGATGATCTG GCACATCTGG TGGCTGGCCA TCGTCGGCTT CGTCGGCATG
ATTGCCACGT TCATCTACCG CACCTTCGAC CAGGACGTGG ACTACTGGGT CCCGGCCGCC
GAGGTGGAAC GCATCGAGAA CGAACACCGC AAGCACCTGG AATCCCAGGG CCTGGTGAAG
TCGGAGCTGA AGGCATGA
|
|---|
| Protein sequence | MLGKLSIESI PHDPIVLTTL IGAVLGGLGV MALITKFKLW GYLWKEWFTS VDHKKIGVMY
LIVAFVMLLR GFSDAIMMRT QQALAVGGSE GYLPPHHYDQ IFTAHGVIMI FFVAMPLITG
LMNLAVPLQI GARDVAFPFV NSLSFWLFVS GAVLIMLSLW IGEFAATGWL AFPPLSGIEY
SPSVGMDYYI WGLQVAGLGT TLSGINFFIT ILKMRTPSMK LMQMPVFTWT ALVTNVLIVA
AFPVLTITLV LLTLDRYLGT HFFTNDGGGN AMLYINLIWI WGHPEVYILV LPAFGVFSEV
IATFSRKALF GYKGMVYATA CIGVLSFIVW LHHFFTMGSG ANVNAFFGIT TMIISIPTGV
KIFNWLFTMF RGRVQFTTPV LWTIGFMVTF TIGGMTGVML AIPAIDFVLH NSLFLIAHFH
NVIIGGVVFG MFAGITYWWP KMFGFRLNEF WGKCAFWCWF IGFYVTFMPM YVLGFMGMTR
RLQSTVNPAY EPLLLVAAAG AFIVGAGILC QIIQVAVSIR DRKKTADLTG DPWDARTLEW
ETSSPPAFYN FGSLPEVTEL DDFWERKQRG EAWPKPAKYT DIHMPRNTGT GVVIGAFSLV
FGFAMIWHIW WLAIVGFVGM IATFIYRTFD QDVDYWVPAA EVERIENEHR KHLESQGLVK
SELKA
|
|---|
| |