Gene Smal_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1140 
Symbol 
ID6474992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1298271 
End bp1299326 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID642730305 
Productubiquinol oxidase, subunit II 
Protein accessionYP_002027528 
Protein GI194364918 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGT TGAAAACCCT TGGGCGCTGG TTGCGCCCGG GCCTGCTGCT GTCGTTGCTG 
GTGATGCTCA CCGGCTGCGA TGCCGTGGCC ATCCTCAGTC CGAAGGGCCA GATCGGCCAG
GATGAGAAGA CCCTGCTGAT CACGGCTACC GTGCTCATGC TGCTGGTCGT CATCCCGGTC
ATCATCATGA CCCTGACCTT CGCGTGGAAG TATCGCGCCT CCAACACCAA GGCCCGTTAC
GAGCCGAAGT GGTCCCACTC GACGGCGATC GAGGTGGTGG TGTGGTCCAT TCCCTGCATG
ATCGTGCTGG TGCTGGCGGT CCTGACCTGG CGTTCGTCGC ACGCGCTGGA CCCGTACAAG
CCGCTGGAAT CGGACGTCAA GCCGGTCACC ATCGAGGCGA TCTCGCTGGA CTGGAAGTGG
CTGTTCATCT ATCCGGAAGA GAAGGTGGCG GTCGTCAACG AAATCAAGTT CCCGGTCAAC
ACGCCGCTGA ACTTCAAGAT CACGTCCGAT ACGGTGATGA ATGCCTTCTT CATCCCGCAC
CTGGGCAGCA TGATCTACTC GATGGCTGCG ATGGAGACCA AGCTCCACCT GATCGCCAAC
GAGACCGGTG AATTCCCGGG CATGTCCTCG CACTACAGCG GCGCGGGCTT CGCCAAGATG
CACTTCACCG CCTACTCGGT CACCGATGCC GAATACCGCC AGTGGCTGGA CCAGGTCCGC
GCCGGCGATC AGACCCTGGA CAAGGCTTCG TTCAAGGCCC TGGGTGATGC GCGCAACGCC
GAGTGGTATC CGGTCACCTA CTTCGGCAAG ACCGAAGAAG GCCTGTTCGA CTGGGTCCTG
GCCAAGCACA TGGGCGACAA CAAGCATTAC GGCATGAAGC ACGAGCACAA GGCCCCGGCC
GACGGTGCTG CTGCTGAAGG CCACGATGCC CATGCGGGTC ACGAGGGCCA CGAAGGCCAC
GCCGACGCCG CTGCCGCTCC GGCCGAACAC GCCGGACACA CTGCTGACGA ACACGCCGCC
GCCGGTCACG CCGGCCACGC GGGTTCGGGA GAATGA
 
Protein sequence
MIPLKTLGRW LRPGLLLSLL VMLTGCDAVA ILSPKGQIGQ DEKTLLITAT VLMLLVVIPV 
IIMTLTFAWK YRASNTKARY EPKWSHSTAI EVVVWSIPCM IVLVLAVLTW RSSHALDPYK
PLESDVKPVT IEAISLDWKW LFIYPEEKVA VVNEIKFPVN TPLNFKITSD TVMNAFFIPH
LGSMIYSMAA METKLHLIAN ETGEFPGMSS HYSGAGFAKM HFTAYSVTDA EYRQWLDQVR
AGDQTLDKAS FKALGDARNA EWYPVTYFGK TEEGLFDWVL AKHMGDNKHY GMKHEHKAPA
DGAAAEGHDA HAGHEGHEGH ADAAAAPAEH AGHTADEHAA AGHAGHAGSG E