Gene Smal_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1134 
Symbol 
ID6474985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1291314 
End bp1291841 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID642730298 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002027522 
Protein GI194364912 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGG ACGCCTTCAT CGCGTTCGTA CGCGAAGAAC GCACGCCGCT GTGCGCGTTC 
CTGCGCACTC GGGGGGTCGG GCCGGAGGAT GCGGAGGATA TCGCGCAGGA CTGCATGGAG
CGGTTGATCC GTTATCGCGC GCACGGGCCC GACGAGCTGC GCCTGCTGCT GTATCGTATC
GCCCGCAACC GCCTGGCGGA TCGCGGCCGC TCGCCGCAAT CGCGACCGCA CCTGTCATTG
GCCGAGCATG ATGGCAGCGA CGAGCCCACC AGCCAGTCGC CCGATCCATT GCGCCAGGCC
GAGTCCGGGC AGATGCTGTC CCTGCTGCGG CAGGCCCTGT TCAAACTGCC CGAGCGCGCG
CGCGAGGTGT ACCTGCTCAA CCGGATCACC GGCATGAGCT ATACGCAGAT CGCGCGGCAC
TGTGGAATCA CCGCCAAGAC CGTGGAAAAA CATATTGCCC GTGCCCTTCA GGGCCTGCGT
CAGGAGCTGG GACCGGACCC GCTGCATCAC GACAGGGACG CCGAATGA
 
Protein sequence
MPADAFIAFV REERTPLCAF LRTRGVGPED AEDIAQDCME RLIRYRAHGP DELRLLLYRI 
ARNRLADRGR SPQSRPHLSL AEHDGSDEPT SQSPDPLRQA ESGQMLSLLR QALFKLPERA
REVYLLNRIT GMSYTQIARH CGITAKTVEK HIARALQGLR QELGPDPLHH DRDAE