Gene Smal_1126 details

Gene Information

• Locus tag: Smal_1126
• Symbol: lspA
• ID: 6474977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stenotrophomonas maltophilia R551-3
• Kingdom: Bacteria
• Replicon accession: NC_011071
• Strand: +
• Start bp: 1281507
• End bp: 1282031
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642730290
• Product: lipoprotein signal peptidase
• Protein accession: YP_002027514
• Protein GI: 194364904
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGCGC CCCGTCCGCA TCCGAACGCC CTGGTCTGGC TGCTGCTGTC GGCGGCCATC 
ATCGGCCTGG ACCAGTGGTC CAAGGCCTGG GTTCTGTCGA GCCTGCCGGA GTTCCAGCCG 
GTGGTGGTCA TCGACGGCTT CTGGAACTGG TACCGCACCT ACAACACCGG TGCGGCGTTC 
AGTTTCCTGA GCGACGCCGG TGGCTGGCAG AAGCACTTCT TCACCGTGCT GGCGATCGCC 
ATCAGTGGCC TGATGGCCTG GTGGCTGCGC AGCACCGCCC GTGGCAACTG GAAGGCGGCG 
GTGCCGTATG CGCTGATCAT CGGCGGCGCC ATCGGCAACG TGATCGACCG CCAGGTGCAT 
GGCCACGTGG TCGATTTCAT CCAGTGGTAC GTGGGCAGCT ACACCTGGCC CTCGTTCAAC 
ATCGCCGATT CGGCCATCGT GGTCGGTGCC GTGGGCATCG CCCTGTTCGG CCTGTTCGAA 
GGCAAGTCCG CCAAAAAGGC GGATAATGCC AACCCGAAAC CGTAA 

 

Protein sequence

MAAPRPHPNA LVWLLLSAAI IGLDQWSKAW VLSSLPEFQP VVVIDGFWNW YRTYNTGAAF 
SFLSDAGGWQ KHFFTVLAIA ISGLMAWWLR STARGNWKAA VPYALIIGGA IGNVIDRQVH 
GHVVDFIQWY VGSYTWPSFN IADSAIVVGA VGIALFGLFE GKSAKKADNA NPKP