| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1123 |
|---|
| Symbol | |
|---|
| ID | 6474974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1276052 |
|---|
| End bp | 1277656 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730287 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_002027511 |
|---|
| Protein GI | 194364901 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.483534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGAG GCCTGCTGTC GTTCAGCAGC ATGACCATGG TCTCGCGGGT GCTCGGACTT
GTCCGTGACC AGGTGATCAC CACCACGTTC GGCACCAATG CGGTTACCGA TGCGTTCTGG
GTTGCCTTCA GGGTACCCAA TTTCCTGCGG CGATTGTTCG CCGAGGGCTC CTTCGCCACC
GCATTCGTGC CGGTGTTCAC GGAAGTGAAG GAGACCCGCA GCCACGCCGA ACTGCGTGAA
CTGATGGCCC GCACCGCCGG CACCCTGGGT GGGGTGCTGA TGCTGGTCAC CGCGCTGGCG
CTGATCTTCG CCCCACAGCT GGCCTCGGTC TTCTCAAGCG GTGTTGATAC CGACCCGGTG
AAGCAGGGCC TGCTGGTCGA CCTGTTCCGG CTGACCTTCC CGTTCCTGTT GTTTGTCTCG
CTGACCGCGC TGGCCGGTGG TGCGCTGAAC AGCTTCCAGC GCTTCGCGAT GCCGGCGCTG
ACCCCGGTGA TCCTCAACCT GTGCATGATC GCCGGCGCGC TGTGGCTGGC GCCGCGGCTG
GGCGGCACCC CGGAGAAGCA GATCCTGGCA CTGGGCTGGG CGGTGCTGGC CGCCGGCCTG
CTGCAGCTGC TGTTCCAGCT GCCTTCGCTG AAGGGCATCA ACCTGCTGAC CCTGCCGCGC
TGGGGCTGGA GCCATCCGGG CGTGCGCAAG GTGATGACGC TGATGGTGCC GACCCTGTTC
GGTTCCTCGG TGGCACAGAT CAACCTGCTG CTGGACACCG TCATCGCCGC CAAGCTGACC
GACGGCTCGC AGTCCTGGCT GTCGCTGGCA GACCGCTTCC TGGAGCTGCC GCTGGGCGTG
TTCGGCGTGG CGCTGGGTAC GGTGATCCTG CCGGCGCTGG CCCGTCATCA TGTGAGCACC
GACCGCGAGG GCTTCTCGCG CTCGCTGGAC TGGGGCCTGC GCATGACCCT GCTGATCTCG
GTGCCGGCCA TGCTGGGCCT GCTGCTGCTG GCCGAACCGC TGATCGCGTC CATCTTCCAG
CACGGCCAGT TCAGTGCCTT CGATACCCGC ATGACCGCGC TGTCGGTGTA CGGCCTGAGC
TTCGGCCTGC CGGCGTTCGC CCTGCTGAAG GTGGTGCTGC CGGCGTTCTA TGCGCGCCAG
GACACCAAGA CCCCGGTGCG CGCCGGCGTG GCCGCACTGG TGGCCAACAT GGTGTTCAAC
TTCGCTCTGC TGGCGGTGCT GTACCAGGTG ATGGTGCCGG ACGAACTGAA GGCGCAGGGC
GTGATGGCCG CCATCGGCAA GCAGCCGGGC CTGCACCTGG CGTTGGGCAT CGCCAGCGCG
CTGTCCAGTT ACCTGAACCT GGGCCTGCTC TGGTACTGGC TGGGCAAGAC CGATGTCTAC
CAGCGTCGGC CGGGTTGGGG CGGCTATCTG GTACGCCTGC TGCTGGCCTG CGCGGCCATG
GTCGGCGTAC TGCTGGCCCT GCTGTACTGG CTGCCGGGCT TCTCGGCGAT GGGTGCATGG
GAGCGGATCG GCGCACTGGC ACTGCTGGTC GGCGGCGGTG GCGCGACCTA TGCGGTGGCC
ATGGTGGCAA TGGGCTTCCG CCCGCGCGAC CTGCGCGGGC ATTGA
|
|---|
| Protein sequence | MLRGLLSFSS MTMVSRVLGL VRDQVITTTF GTNAVTDAFW VAFRVPNFLR RLFAEGSFAT
AFVPVFTEVK ETRSHAELRE LMARTAGTLG GVLMLVTALA LIFAPQLASV FSSGVDTDPV
KQGLLVDLFR LTFPFLLFVS LTALAGGALN SFQRFAMPAL TPVILNLCMI AGALWLAPRL
GGTPEKQILA LGWAVLAAGL LQLLFQLPSL KGINLLTLPR WGWSHPGVRK VMTLMVPTLF
GSSVAQINLL LDTVIAAKLT DGSQSWLSLA DRFLELPLGV FGVALGTVIL PALARHHVST
DREGFSRSLD WGLRMTLLIS VPAMLGLLLL AEPLIASIFQ HGQFSAFDTR MTALSVYGLS
FGLPAFALLK VVLPAFYARQ DTKTPVRAGV AALVANMVFN FALLAVLYQV MVPDELKAQG
VMAAIGKQPG LHLALGIASA LSSYLNLGLL WYWLGKTDVY QRRPGWGGYL VRLLLACAAM
VGVLLALLYW LPGFSAMGAW ERIGALALLV GGGGATYAVA MVAMGFRPRD LRGH
|
|---|
| |