| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1090 |
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| Symbol | |
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| ID | 6474941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1244804 |
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| End bp | 1246768 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642730254 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_002027478 |
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| Protein GI | 194364868 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATG ACGCTGCGCC CAAGCAGCTC ACTTTCCGCG CGGTGGTCCT TGCCATCGTG
CTGGCAGTGG TGCTGTCGGC CGCAAACGCC TACCTCGGTC TGTTCGCAGG CCTGACCATC
GCCACCGCGA TTCCCGCCGC GGTCATTTCC ATGGGCGTGC TGCGCCTGCT GGGTGGCGGT
TCCATCCTTG AAAACAACAT CGTGCAGACC GGCGCCTCGG CCGGCTCGTC GATCGCCGCC
GGTGTCATCT TCACCATCCC GGCGCTGGTG ATCATGGGCT ACTGGCCCGA CTTCAAGTAC
TGGTGGGTGC TGGGCATCGC TGGTCTCGGC GGCCTGCTGG GCGTGCTGTT CTCGGTGCCG
CTGCGGCGTT CGATGATCGT TGAAGACCCG CTTCCGTTCC CGGAAGGCAA GGCCGCGGCC
GAAGTGCTCA AGGCCGGTGA GAACCCGGGC CCGGGCCTGA AGATCCTCGG CCTGTCGGCG
GTGATCGGTG CGTTCGTGAA GCTGGCCGCG GAAAGCGGCA TGCGCCTGAT TCCCGATGCC
TGGGCTACCT CGGCCTACGT CGGCAGCTCC AAGGTCACCG CCTTCATCGG CACCAACCTG
TCCCCGGCGC TGCTGGGCGT GGGCTACATC GTCGGCCTCA ACGTCGGCAT CGTGGTGGTG
TCCGGCTCGA TCCTGACCTG GCACATCGCC ATTCCGATCT ACCAGGCGTT CTTCATGAAC
ACCGATCCGG GCCTGGCCGC CTCGGTCGCT ACCGCATCCT CCACCGAGGC GGCGTTCGCC
ATCTGGGGCG CGAAGATGCG CTACCTGGGT GTGGGCGCGA TGCTGATCGG CGGCATCTGG
ACCCTGATCT CGCTGCGCAA GTCGCTGCTC AACGGCGTCA AGAGCGGCTT TGCCGCTGCC
CGCAAGAGCG GTGGCCCGGT ACTGGCGCAC ACCGAACGCG ACCTGCCGAT GAAGTGGATG
CTGGTGGCCC TGGTGGTGTT CACCCTGCCG CTTCTGGCGC TGTACCAGGC CATCGTCGGC
CAGTGGCACG TGTCGATCCC GATGACCTTG ATCATGATCG TCGCCGGCTT CCTGTTCGTG
TCGGTGTCGG CCTACCTGGC CGGCCTGATC GGTTCGTCCA ACAACCCGGT CTCGGGCATC
ACCATCTCCA CCATCCTGTT CGCTTCTGCG GTGCTGGTGC TGCTGCTGGG CAAGGACGGC
CTGCAGCCGG TCGGTGCCTT CGGCGCGCCG CTGGGTGCGG TGGCGGCAAT CATGATCGGC
GCGGTGGTGT GCTGCGCCGC CGCGGTCGGT GGTGACAACC TGCAGGATCT GAAGGCCGGC
TACATTGTTG GCGCGACACC GTGGAAGCAG CAGTTGATGC TGGGCATCGG CGCATTCTCG
TGCGCGCTGA TCATGGCCCC GGTGCTGAAC CTGCTGGCCA CCGCCTACGG CATCGGCGTC
AAGTCCGAGC TGCACCCGAA CGCGCTGGCT GCGCCGCAGG CCAACCTGAT GGCCTCGGTC
GCAAAGGGCC TGTTCGGTGG TGAACTGCCG TGGACCTTCA TCGGCATCGG TGCCGTGGTC
GGTGCGGCCA TCATCGCCTT CGACAGCTGG CTCAAGTCGC GCAACGCGCG CTTCCGCGTG
CCGGTGCTGG CCGCCGCGAT CGGTATCTAC CTGCCGCTGG AGCTGATGGT GCCGATCTTC
CTCGGCGGCC TGATCTCCTA CCTGGTCGAG CGCTTCCACA AGGTGCGCGC CGACGATGAA
GAAGGCCGCG ACCGCGTGCA CAAGCCGGGC GTGCTGTTCG CCGCCGGCCT GATCACCGGC
GAGGCGTTGA TGGGTATCGC CATCGCCGTG CCGATCGTGG TCAGCAGCCG CGCCGATGTG
CTGGCCGTAC CGTTCCATCT GCCGGCCGCG CAGTGGATCG GCCTGGCTGT GTTGTTCCTG
GTCGGCTGGC TGATCTACCG CACCGGCAAG CGCGCCGTAG CGTAA
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| Protein sequence | MNHDAAPKQL TFRAVVLAIV LAVVLSAANA YLGLFAGLTI ATAIPAAVIS MGVLRLLGGG
SILENNIVQT GASAGSSIAA GVIFTIPALV IMGYWPDFKY WWVLGIAGLG GLLGVLFSVP
LRRSMIVEDP LPFPEGKAAA EVLKAGENPG PGLKILGLSA VIGAFVKLAA ESGMRLIPDA
WATSAYVGSS KVTAFIGTNL SPALLGVGYI VGLNVGIVVV SGSILTWHIA IPIYQAFFMN
TDPGLAASVA TASSTEAAFA IWGAKMRYLG VGAMLIGGIW TLISLRKSLL NGVKSGFAAA
RKSGGPVLAH TERDLPMKWM LVALVVFTLP LLALYQAIVG QWHVSIPMTL IMIVAGFLFV
SVSAYLAGLI GSSNNPVSGI TISTILFASA VLVLLLGKDG LQPVGAFGAP LGAVAAIMIG
AVVCCAAAVG GDNLQDLKAG YIVGATPWKQ QLMLGIGAFS CALIMAPVLN LLATAYGIGV
KSELHPNALA APQANLMASV AKGLFGGELP WTFIGIGAVV GAAIIAFDSW LKSRNARFRV
PVLAAAIGIY LPLELMVPIF LGGLISYLVE RFHKVRADDE EGRDRVHKPG VLFAAGLITG
EALMGIAIAV PIVVSSRADV LAVPFHLPAA QWIGLAVLFL VGWLIYRTGK RAVA
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