Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1086 |
Symbol | |
ID | 6478513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1238798 |
End bp | 1239433 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730250 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002027474 |
Protein GI | 194364864 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.103824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCGG TCATCTCCGC CAGCACCGGC CTCGGTGCCT GGTTCTCTGG TGCAGCCACC GGCATCGGCC TGTTCGCCGT GGTCGGGGCC CAGAGCGCCT TCATCCTGCG CCAGGGCATC CTGCGCAAGC ACATCGTGCC GGTGGTCGCC ACCTGCGCGG CCATCGATGC GATCTTCATC TTCGCCAGCG TGGCCGGCCT GCGCACGCTG ACCTCGGCGC TGCCGTGGCT GACCACGGCC GTGTTGTGGA CCGGCGTGGC CTTCCTGGCC TGGTACGCGA TGAAGTCGGC ACGCCGCGCG ATCGCCGGTG GCGGCGGCAT GGGCGAGGCT GACAGCGACG ACGGCAGCCG CCGCGCGGTG CTGATGGCCG CAGTCGGTTT CTCGTTGATC AATCCGCACT TCTGGCTGGA CATGATGGTG ATCGGCTCGA TCGCCGAGAA CTTCGGCAAT GCCCGCATGG CCTTCGCGGC CGGTGTGGTT ACTGCCAGCT GCCTGTGGCT GACCGCGCAG GGTCTCGGCG CACGCCTGCT CGCACCGCTG TTCACCAAGC CCAGCACCTG GCGCGTGCTG GACGGCACCA TCGCCGTGAT CCTCAGCATC CTGGCCCTCA CATTGGCGGT GCGCGGGGTC CATTGA
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Protein sequence | MFSVISASTG LGAWFSGAAT GIGLFAVVGA QSAFILRQGI LRKHIVPVVA TCAAIDAIFI FASVAGLRTL TSALPWLTTA VLWTGVAFLA WYAMKSARRA IAGGGGMGEA DSDDGSRRAV LMAAVGFSLI NPHFWLDMMV IGSIAENFGN ARMAFAAGVV TASCLWLTAQ GLGARLLAPL FTKPSTWRVL DGTIAVILSI LALTLAVRGV H
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