Gene Smal_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1086 
Symbol 
ID6478513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1238798 
End bp1239433 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID642730250 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002027474 
Protein GI194364864 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.103824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGG TCATCTCCGC CAGCACCGGC CTCGGTGCCT GGTTCTCTGG TGCAGCCACC 
GGCATCGGCC TGTTCGCCGT GGTCGGGGCC CAGAGCGCCT TCATCCTGCG CCAGGGCATC
CTGCGCAAGC ACATCGTGCC GGTGGTCGCC ACCTGCGCGG CCATCGATGC GATCTTCATC
TTCGCCAGCG TGGCCGGCCT GCGCACGCTG ACCTCGGCGC TGCCGTGGCT GACCACGGCC
GTGTTGTGGA CCGGCGTGGC CTTCCTGGCC TGGTACGCGA TGAAGTCGGC ACGCCGCGCG
ATCGCCGGTG GCGGCGGCAT GGGCGAGGCT GACAGCGACG ACGGCAGCCG CCGCGCGGTG
CTGATGGCCG CAGTCGGTTT CTCGTTGATC AATCCGCACT TCTGGCTGGA CATGATGGTG
ATCGGCTCGA TCGCCGAGAA CTTCGGCAAT GCCCGCATGG CCTTCGCGGC CGGTGTGGTT
ACTGCCAGCT GCCTGTGGCT GACCGCGCAG GGTCTCGGCG CACGCCTGCT CGCACCGCTG
TTCACCAAGC CCAGCACCTG GCGCGTGCTG GACGGCACCA TCGCCGTGAT CCTCAGCATC
CTGGCCCTCA CATTGGCGGT GCGCGGGGTC CATTGA
 
Protein sequence
MFSVISASTG LGAWFSGAAT GIGLFAVVGA QSAFILRQGI LRKHIVPVVA TCAAIDAIFI 
FASVAGLRTL TSALPWLTTA VLWTGVAFLA WYAMKSARRA IAGGGGMGEA DSDDGSRRAV
LMAAVGFSLI NPHFWLDMMV IGSIAENFGN ARMAFAAGVV TASCLWLTAQ GLGARLLAPL
FTKPSTWRVL DGTIAVILSI LALTLAVRGV H