Gene Smal_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1079 
Symbol 
ID6478506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1229668 
End bp1230576 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID642730243 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_002027467 
Protein GI194364857 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG TACAGCGTCA CAGCTACTAC GAAGCCGACG CACGCGAGCG TATCGCCGGC 
CTGGTCGATG CCGGTTCGTT CCAGGAATTC CTGGGCCCTG CGCGACGGAT GATGAGCCCG
CATCTGGCGC AGCTGGACCA GCCGGCGGCG TTCGACGACG GCATCGTCGT CGGTGAAGCC
ACGCTGCGCG GCAAGCGCGT GCTGCTGGCC GCGCAGCAGG GTGAATTCAT GGGCGGCGGC
GTCGGCGAAG TGCACGGTGC AAAGCTGACC GGCCTGCTGC GCCGTGCGGC GGCGACCCGG
CCCGACGGCG TGTTGCTGCT GCTCGATACC GGCGGCGTAC GCCTGCACGA GGCCAACGCG
GGATTGATTG CCATTTCCGA GATCATGCGC GCCACGCTGG ATGCGCGCGC TGCAGGCGTG
CCGGTGGTGG CACTGATCGG CAGCGGCAAT GGCGCGTTCG GTGGCATGGG CATCGTCGCC
CGCTGCTGCA GCACCGTGAT CATGTCCGAG GAAGGCCGGC TGTCACTGTC CGGGCCGGAA
GTGATTGAAA CCGTTCGCGG CGTGGAGGAA TTCGATTCCC GCGACCGCGC GCTGGTCTGG
CGGGTGACCG GTGGCAAGCA CCGCTACCTG ATCGACCAGG CGCAGGTACT GGTGCCCGAT
GCCATCGAGG CGTTCGCGCA GGCAGCGTTC GATGCACTGC AGCCGCACAC GGCCAGCACC
GATGCCGATG CGGCATTGAG TGCGCTGCAG GCCCACCATG CCGCGTTGAA GGCACGCGTG
CAGGCCTGGG GCGGATGCCG CGATGGTCTT GAGATCTGGT CCCTCCAGGG CATCGCCGAA
CCCGAGCGGC TGCCGCTGCT GGACACCAAC GACTTCCTCG TCGCCACCGC CGACCGGAGC
CTGCCATGA
 
Protein sequence
MNRVQRHSYY EADARERIAG LVDAGSFQEF LGPARRMMSP HLAQLDQPAA FDDGIVVGEA 
TLRGKRVLLA AQQGEFMGGG VGEVHGAKLT GLLRRAAATR PDGVLLLLDT GGVRLHEANA
GLIAISEIMR ATLDARAAGV PVVALIGSGN GAFGGMGIVA RCCSTVIMSE EGRLSLSGPE
VIETVRGVEE FDSRDRALVW RVTGGKHRYL IDQAQVLVPD AIEAFAQAAF DALQPHTAST
DADAALSALQ AHHAALKARV QAWGGCRDGL EIWSLQGIAE PERLPLLDTN DFLVATADRS
LP