| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1075 |
|---|
| Symbol | |
|---|
| ID | 6478502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1226556 |
|---|
| End bp | 1227476 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642730239 |
|---|
| Product | malonate decarboxylase, epsilon subunit |
|---|
| Protein accession | YP_002027463 |
|---|
| Protein GI | 194364853 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTA CCCTGCTCTG CCCCGGACAA GGTGCACAGC ATCCGGCGAT GTTCGATCGC
GTGCGCGACC TTGCTGCCGC ACGGCCGGTA CTCGATGCCA CGAGCGAACT GCTGGGCCGC
GATGTATTCG CCGCCGCGGC GGCCGACGAC CGCTTCGACA ATGTGCAGGC CCAGCCCCTG
CTGTGCGCGG CAAGCCTGGC GCACTGGCAG GGCCTGCGCG AGGTGTTGCC AACGCCGACG
GTGATCGCGG GCTACAGCAT CGGCGAGCTC GCCGCACATG CCATCGCCGG CAGCTTCGAC
ATCACCACCT GCCTGGCACT GTCCGCGCAG CGCGCGCGCC TGATGGATGC CGCCAGCCCC
GATGACGCCG GGCTCCAGGC AGTACTGGGA CTGGACCGCG TTGCCACGCA GCAGTTGTGC
GATGTGCATG GCGCCTTCAT CGCGATCGCC AATGGCCACG ACCACTTCAT CGTGGGCGGC
GCATGGCGGT CGCTGCACGC ATTGGCGATG GACGCGCAGT TGCGCGGTGC GGAGATCCGC
CCGCTGCCGG TCCATGTGCC CGCGCACACG CCGCTGCTGG CCGGCGCAGT GGCACCGTTT
GCCGCCGCAC TGGAAGCAGT GTCACTGCAG GCGCCACGCC TGCCCCTTCT GGCCGGCATC
GATGCGCGAC CGGTGCGGGA TCGCGCAACG GCGGTCCACA CGCTGTCGGC GCAGCTCGCG
CAGACCATCG AATGGGCGCA GGTGATGCGC CAGGCCTTCG AGCGTGGCGC GCGGGTGTTC
CTGCAGCTGG GCCCGGGCAA CGCATTGGCG CGCATGGTCG CGCCGGCCTA TCCGTGCTGC
GAGGTACGCG CGGTGGAAGA GTTCCAAAGC CTTGAAGGCG CGGCGGCATG GGTTCGCAGT
GCGCTGGAGC GGCTGCAGTA A
|
|---|
| Protein sequence | MSLTLLCPGQ GAQHPAMFDR VRDLAAARPV LDATSELLGR DVFAAAAADD RFDNVQAQPL
LCAASLAHWQ GLREVLPTPT VIAGYSIGEL AAHAIAGSFD ITTCLALSAQ RARLMDAASP
DDAGLQAVLG LDRVATQQLC DVHGAFIAIA NGHDHFIVGG AWRSLHALAM DAQLRGAEIR
PLPVHVPAHT PLLAGAVAPF AAALEAVSLQ APRLPLLAGI DARPVRDRAT AVHTLSAQLA
QTIEWAQVMR QAFERGARVF LQLGPGNALA RMVAPAYPCC EVRAVEEFQS LEGAAAWVRS
ALERLQ
|
|---|
| |