Gene Smal_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1071 
Symbol 
ID6478498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1222761 
End bp1223708 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID642730235 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_002027459 
Protein GI194364849 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAG TCATTTTCGA TACCGACCCG GGCGTCGACG ACGCCCTGGC CCTGCTGTAC 
CTGCACAAGC ACCCGCAGAT CGACCTGATC GGCGTCACCA CCACCTTCGG CAACGCCTCG
GTGGAGTCGA CCACGCACAA TGCGCTGTAC CTGAAGCAGG CCTGGGGCTT TGCCGCCCCG
GTCGCGCGCG GTGCCGGTGG CCCGCTGCAG CCCGAAGCTA CCCCGGAAGC CTGGCCGGTG
CACATCCACG GCCACAACGG CCTGGGCAAC CACCCGGTGC CGGCCAGCCT GGACGTGGCC
GTCGATGCGC GCCCGGCGGC CCAGCTGATC ATCGATCTGG TCCGCGCCCA TCCGGGCGAA
GTGACCCTGG TCGCGGTCGG CCGCATGACC AACCTGGCCC TTGCCCTGCA GCAGGCTCCG
GACATCGCCG GCCTGGTGCG CGGCGTGGTG CTGATGGGCG GCGCCTTCCA CGTCAACGGC
AACATCACCC CGGCCGCCGA GGCCAACATC TGGGGCGACG CCGAAGCAGC CGACATTGTG
TTCACCGCGC AGTGGCCGGT CACGGCGATC GGGCTGGATG TCACCACCCG CGTGGAAATG
AACCGCGACG GCCTGGACAA GCTGGCCGCC ATCGGCGGTG CCGACGCCGA GCTGGTCCGT
GCGCTGTCGC AGGACTACGT CGACTTCTAC CTGCAGGCCG GCCACAAGGG CATGGTCGTG
CATGACTGCT GCGCCTGCAT CGCGCTGACC CGCCCGGAGC TGTTCCAGTT CGAACGTGCC
AGCGTGCGCG TGGCCACCGA TGGCGTTGCC CGCGGCATGA CCATTCCCAA GCCGGAAGGC
ATGGGCTTTG GTCCCAGCGT GTGGGACGGC CATGTACTGC AGTCGATTGC CATCGGCGTG
GATGCGGCCG CCGTACTGGC CGACATCGAG CAGACCCTGA AGGTCTGA
 
Protein sequence
MLKVIFDTDP GVDDALALLY LHKHPQIDLI GVTTTFGNAS VESTTHNALY LKQAWGFAAP 
VARGAGGPLQ PEATPEAWPV HIHGHNGLGN HPVPASLDVA VDARPAAQLI IDLVRAHPGE
VTLVAVGRMT NLALALQQAP DIAGLVRGVV LMGGAFHVNG NITPAAEANI WGDAEAADIV
FTAQWPVTAI GLDVTTRVEM NRDGLDKLAA IGGADAELVR ALSQDYVDFY LQAGHKGMVV
HDCCACIALT RPELFQFERA SVRVATDGVA RGMTIPKPEG MGFGPSVWDG HVLQSIAIGV
DAAAVLADIE QTLKV