| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1059 |
|---|
| Symbol | |
|---|
| ID | 6478486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1211558 |
|---|
| End bp | 1212532 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730223 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002027447 |
|---|
| Protein GI | 194364837 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAT CTACCCCGTT CAGCCCCGCC CTGCTGCCGC ATCTGGCCGG CTTCGCCCAC
ATTGCCCACC ACCGCAGCTT CACCAAGGCG GCCGACGAGA TGGGCATCTC GCGTCCGGCG
CTGTCGCAGA ACCTGAAGAC GCTGGAGAAG CAGCTGGGCG TGCGTCTGCT GCACCGGACC
ACCCGTGAGA TGTCGCTGAC CGAGGAAGGG CAGCGCCTGT TCGACGCACT ACGGCCGTCG
CTGGGCACCA TCGAAGCCGC GGTACGCGGC CTGCGCGCCA ACCACGATGC ACCGTCGGGC
CTGCTGCGCA TCAACACCGC GCGCCTGACC GCCAAGACCC TGATCGAACC GCACCTGCCG
GAATTCTTCG CGCGCTTTCC CGAGCTGCGC ATCGAACTGG TGATGGATGA TGGCCTGTCC
AGCATCGTCG CCGACGGCTG CGACGCCGGC ATCCGCCTCG GTGAACGCCT GGCCGAGGGC
ATGATCGCGG TTCCGGTCAC GCCGATGCTG GAAATGGTGG TCGCCGCCTC GCCCCACTAC
CTGGCCCGGC ATGGCACGCC AACAACGCCG GCCGAACTGG CCTCGCACGA ATGCCTGGGC
TACCGACAGA CCGGCAGCGG CAACATCTAT GCCTGGGAGT TCAGCACGCC CGGCCAACCC
GGCCATGACT TTGAGGTGGA ACCACGCGGT CGCTATGTCA GCAACGACGA CGAAGGGATG
ATCCGGGCGG CGCTGCAGGG ACTGGGCGTG ATGCAGCACA TCGACCTCTC CTTGCAGCCG
ATGCTGGCCG ATGGACGCCT GGTCCGCTTG ATGCCGGAGT GGTCCACGCC GTTCCCCGGC
TTCTACCTGT ATGTGCCTTC GCGCGAGCAG ATGCCACCTC GCGTGCGTGC ACTGATGGAG
TTCCTGATCG AGAAGCGCGA AGGCGTCGCC AAGGCGCTCG GCCGCACGGT GCAGGCCCCC
GCCACCCGCG GCTAG
|
|---|
| Protein sequence | MNPSTPFSPA LLPHLAGFAH IAHHRSFTKA ADEMGISRPA LSQNLKTLEK QLGVRLLHRT
TREMSLTEEG QRLFDALRPS LGTIEAAVRG LRANHDAPSG LLRINTARLT AKTLIEPHLP
EFFARFPELR IELVMDDGLS SIVADGCDAG IRLGERLAEG MIAVPVTPML EMVVAASPHY
LARHGTPTTP AELASHECLG YRQTGSGNIY AWEFSTPGQP GHDFEVEPRG RYVSNDDEGM
IRAALQGLGV MQHIDLSLQP MLADGRLVRL MPEWSTPFPG FYLYVPSREQ MPPRVRALME
FLIEKREGVA KALGRTVQAP ATRG
|
|---|
| |