Gene Smal_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1055 
Symbol 
ID6478482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1207600 
End bp1208625 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID642730219 
Producthypothetical protein 
Protein accessionYP_002027443 
Protein GI194364833 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.725462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACG CCCTTGTTGC CCAGCCCAAG CCCCCCGTCC CGAGGATCGC GGCCTGGCTG 
ATGATGCTGC TGGGCATGTG GCTGGCGTTG AAGCTGGGCC TGGTGGTGAC CCTGCTGTCG
GGTCTGCTGG TGTTCCAGCT GACCCACCTG CTGGCCTCCA CCGTGGAGGG CAAGCTGCCG
CCAGGTCGGG CGCGGGCCAT CGCGGTGATC GTGCTGTCAG CGGTGATCAT CAGCGCGCTG
GTGCTGGCCG GAATCGGCGT GGCGTCATTT TTCCGCAACG AGACCGGTGG GCCGGACGCG
CTGCTGGCAC GGCTGATGGA GATCCTCAAT TCGTCGCGGC ACCAGGTGCC GGCGCTGCTG
CAGCCGTACA TCCCCGAGGA CATGCCGGCA CTGCGCACGG CGCTGAACGA CTGGGCCGCC
GAACATCAGC GCCAGCTGGG CGTGGCCGGT ACCTCGGTGG TGCAGGTGGG TGTACGCGTA
CTGATCGGTA TGGTGCTGGG CGCGATGATT GCGTTGTACG ACGAACTGCC GCTGCCGAAG
ATGGGCCCGC TGGCGCAGGA GCTGATCGGC CGCACCAGCC GCCTGGCCAC CGCGTTCCGC
CAGGTGGTGT TCGCGCAGGT GAAGATCTCG CTGCTCAATA CCGTGTTCAC CGCCATCTTC
CTGCTGGGCG TACTGCCGTT GTTCGGCGTG CACCTGCCAC TGTCCAAGAC CCTGGTGCTG
ATCACCTTCA TCGCCGGCCT GCTGCCGGTG GTGGGCAACA TCATCTCCAA CACCATCATC
ACCATCGTCG CGCTGTCGGT TTCGTTCTAC GTGGCCGTGG CCGCGCTGCT GTACCTGATC
GTGATCCACA AGCTGGAGTA CTTCCTCAAT GCGCGCATCG TTGGCGGCGA AATCCAGGCC
CGTGCCTGGG AGCTGCTGCT GGCGATGCTG GTGATGGAAG CGGCGTTCGG CCTGCCGGGC
CTGGTCGCCG CGCCGGTGTT CTACGCCTAT GTGAAGCGCG AACTGGTCGA CCAGCGCTGG
ATCTAG
 
Protein sequence
MQDALVAQPK PPVPRIAAWL MMLLGMWLAL KLGLVVTLLS GLLVFQLTHL LASTVEGKLP 
PGRARAIAVI VLSAVIISAL VLAGIGVASF FRNETGGPDA LLARLMEILN SSRHQVPALL
QPYIPEDMPA LRTALNDWAA EHQRQLGVAG TSVVQVGVRV LIGMVLGAMI ALYDELPLPK
MGPLAQELIG RTSRLATAFR QVVFAQVKIS LLNTVFTAIF LLGVLPLFGV HLPLSKTLVL
ITFIAGLLPV VGNIISNTII TIVALSVSFY VAVAALLYLI VIHKLEYFLN ARIVGGEIQA
RAWELLLAML VMEAAFGLPG LVAAPVFYAY VKRELVDQRW I