Gene Smal_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1053 
Symbol 
ID6478480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1205585 
End bp1206517 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID642730217 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002027441 
Protein GI194364831 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.262564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.905939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GCCACCTGCG CTACTTCGTC ATGACCGCCC AACTGCAGAG CTTCACCAAG 
GCCGCCGAGG CCCTGCATAT CGCCCAGCCA CCGCTCGGGC AGCAGATCCG CGCGCTGGAG
GAAGAGATCG GCACGCCGCT GTTCCATCGC CAGGGACGCG GCATCGTGCT CAGTGACGCG
GGCCGCGTGT TCTGGGCAGC AGCCGTGGAC ATCCTCGCGC GCGTCGACCA CGCCAAGGAG
CAGGCGCTGA GCGCTGCACG CGGCGAGGTC GGCACGCTCA CGCTGGGGCT GACCGAATCG
GCCTCATACA ACGACGCGGT GACCGCACTG CTGCGCAGGT TCCGGCAGGC GCATCCGGCG
GTGCAGCTGC AACTGGTCGA AGACGGCAGT GAATCCCTGA TCCGGCGCCT GGACGACGGC
GAACTGGACG CGGTGATCGT GCGCCCACCG TATTCGCATC CTGGCGAGCT GGTGATCCAG
CAGCTCAGCG CCGAACCACT GGTGGCGGTA CTGCCGGCCG AACACCCGCT GGCCGGCCGG
GCGGGCATCG CACTGACCGA GCTGCGCGAT GAGCGCTTCA TCCTGTTCTC GCGGAAATCC
GGCTATGGCC TGAGCGCCGA TGTCGTCGCT GCCTGCCGCA GCCAGGGCTT CACCCCCACC
ATCCAGCAGG AAGCGCCACA GGTGGCCTCG GCCATCAACC TGGCTGCAGC GGGCCTGGGC
ATCGCTATCG TGCCGGCCTC GATGCAGACC CTGCATCGGC CGGGCCTGGC CTTCGTCGCG
CTGGAACTGG GCATGCCGAT CACCGCCCTG CAGCTGGCCA TGCGCGGCCA GCATCCTGCA
CTGGCCGCCG CGCTGCTGCG CTGTGCATGC AGCAGCGCAC ACCCGCCGAC GGCGCCGGAC
GATGCCCGCA GTACAGAGCT GCGTACCCCT TGA
 
Protein sequence
MELRHLRYFV MTAQLQSFTK AAEALHIAQP PLGQQIRALE EEIGTPLFHR QGRGIVLSDA 
GRVFWAAAVD ILARVDHAKE QALSAARGEV GTLTLGLTES ASYNDAVTAL LRRFRQAHPA
VQLQLVEDGS ESLIRRLDDG ELDAVIVRPP YSHPGELVIQ QLSAEPLVAV LPAEHPLAGR
AGIALTELRD ERFILFSRKS GYGLSADVVA ACRSQGFTPT IQQEAPQVAS AINLAAAGLG
IAIVPASMQT LHRPGLAFVA LELGMPITAL QLAMRGQHPA LAAALLRCAC SSAHPPTAPD
DARSTELRTP