Gene Smal_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1039 
Symbol 
ID6478466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1191783 
End bp1192511 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID642730203 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002027427 
Protein GI194364817 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.967418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCG TACTGATCAC CGGCTGTTCC TCCGGCTTCG GGCTGGAGAC CGCCCGCCTG 
TTCCTCGACC GTGGCTGGAA GGTCATCGCC ACCATGCGCA CCCCGCGCAC CGACCTGCTG
CCGGCGTCCG CGCATCTGCG CGTGCTCGCC CTGGACATCA CCGATCCGGC CAGCATCGCG
CACGCCATCG CCGAGGCCGG CCCGATCGAC ATGCTGGTCA ACAACGCCGG TTTCGGCGCA
CCGGTGCCGG TGGAACTTAC GCCACTGGAA ACAGCGCGTG CCCTGTTCGA CACCAACACC
CTGGGCACGC TGGCCATGAC CCAAGCCGTG CTGCCGCAGA TGCGCGAGCG CGGCGACGGC
GTGATCGTCA ACATGACCAC CACGGTGACG GTGAAGGCGC TGCCGCTGGT GGGCGTGTAC
AGCGCCAGCA AGGCGGCGGT GAACGCCTTC ACCGAATCAT TGGCCATCGA AGTCGCGCCG
CTGGGCGTGC GCGTGCGCCT GGTGCTGCCC GGCCGCGCGC CGACCACGCG CTTCGGCGAA
AACGCGTTCC CGCATCTGGG CGGCATGGAG CACCCTGCCT ATGCGCCGCT GGTGCAGGGC
GTGCTGGCCA GCTTTCGCGA CAGCAGCGGC CCGGTGACCA CGCCGCAGGC CGTGGCCGAA
GCCGTATGGC GCGCGGTGAC CGACGAGAAC CCGCCGATGC GCAATCCCGG GGGCGATGAC
GCGGTGTAG
 
Protein sequence
MQTVLITGCS SGFGLETARL FLDRGWKVIA TMRTPRTDLL PASAHLRVLA LDITDPASIA 
HAIAEAGPID MLVNNAGFGA PVPVELTPLE TARALFDTNT LGTLAMTQAV LPQMRERGDG
VIVNMTTTVT VKALPLVGVY SASKAAVNAF TESLAIEVAP LGVRVRLVLP GRAPTTRFGE
NAFPHLGGME HPAYAPLVQG VLASFRDSSG PVTTPQAVAE AVWRAVTDEN PPMRNPGGDD
AV