Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1039 |
Symbol | |
ID | 6478466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1191783 |
End bp | 1192511 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642730203 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002027427 |
Protein GI | 194364817 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.967418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCG TACTGATCAC CGGCTGTTCC TCCGGCTTCG GGCTGGAGAC CGCCCGCCTG TTCCTCGACC GTGGCTGGAA GGTCATCGCC ACCATGCGCA CCCCGCGCAC CGACCTGCTG CCGGCGTCCG CGCATCTGCG CGTGCTCGCC CTGGACATCA CCGATCCGGC CAGCATCGCG CACGCCATCG CCGAGGCCGG CCCGATCGAC ATGCTGGTCA ACAACGCCGG TTTCGGCGCA CCGGTGCCGG TGGAACTTAC GCCACTGGAA ACAGCGCGTG CCCTGTTCGA CACCAACACC CTGGGCACGC TGGCCATGAC CCAAGCCGTG CTGCCGCAGA TGCGCGAGCG CGGCGACGGC GTGATCGTCA ACATGACCAC CACGGTGACG GTGAAGGCGC TGCCGCTGGT GGGCGTGTAC AGCGCCAGCA AGGCGGCGGT GAACGCCTTC ACCGAATCAT TGGCCATCGA AGTCGCGCCG CTGGGCGTGC GCGTGCGCCT GGTGCTGCCC GGCCGCGCGC CGACCACGCG CTTCGGCGAA AACGCGTTCC CGCATCTGGG CGGCATGGAG CACCCTGCCT ATGCGCCGCT GGTGCAGGGC GTGCTGGCCA GCTTTCGCGA CAGCAGCGGC CCGGTGACCA CGCCGCAGGC CGTGGCCGAA GCCGTATGGC GCGCGGTGAC CGACGAGAAC CCGCCGATGC GCAATCCCGG GGGCGATGAC GCGGTGTAG
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Protein sequence | MQTVLITGCS SGFGLETARL FLDRGWKVIA TMRTPRTDLL PASAHLRVLA LDITDPASIA HAIAEAGPID MLVNNAGFGA PVPVELTPLE TARALFDTNT LGTLAMTQAV LPQMRERGDG VIVNMTTTVT VKALPLVGVY SASKAAVNAF TESLAIEVAP LGVRVRLVLP GRAPTTRFGE NAFPHLGGME HPAYAPLVQG VLASFRDSSG PVTTPQAVAE AVWRAVTDEN PPMRNPGGDD AV
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