Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1034 |
Symbol | |
ID | 6478461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1182895 |
End bp | 1186275 |
Gene Length | 3381 bp |
Protein Length | 1126 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642730198 |
Product | type III restriction protein res subunit |
Protein accession | YP_002027422 |
Protein GI | 194364812 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0485696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG TCAATTTTGA ATTTCTTCGC CCTGTAAACG AACTGCTGGC CAATCTGGCC GGTCTTGCAG AGGGGGTTCT GCATGTCGAT CCCGGCAGCG CACTTACACG GTTGCGCAGT TTCGCTGAGG AGTTGACCAA GACCATCTAC AGCGAGGAGC GTCTGCCACG CTTGCCGCAG TCCACTTTCT ATGACTTGGT GAAGAGTCCG GTATTCACCG CGTGCACAAG CAGCTCGCTG GTCCATCAGA TCAATTTCCT GCGTATCCAG GGCAATGAAA CAGCCCATGG CGGCGAAGGA GATGTCCGCA CGGCCAGATC GGCATTGAAG ACGGCTCACG AGCTGGCCAA GTACATGGCC GTGAAGTACT ACAGGCTGGC CCATTCGGAC TTGCCGGCTT TTGTCGAGGT CAAGGATCCC ACCACTGCGC TCAACGCGTT GCAGAAGTCA GTTGTCAGCT ATGAGAAGGA GCTGGCCAAA CAGCAGGAAG AGCTGCAGCG TGTTTTGGAA CAGTTGGAGC AGAAGCGGGT ACGTGATCTT GGAAAAGTCG AAACGCCTGC TCCAGCAGAT CAGAGGCAGC GCCAGGAAAG GAGCGAGCAG GTTGCCGGCA GCCTGCAATG GAGTGAGGCT AAGACCCGCA AGCTCCTGAT CGACGCCATG CTGCTTCAGG CCGGCTGGGA TGTGGGCAGC CCCGCACAGG TCGGGTTGGA GGTGGAAGTC GATTTTCCAG GCAACGCCAG CGGCAAGGGC TATGCAGACT ATGTGCTGTG GGGAGACAAC GGCCAGCCTC TGGCGGTGGT CGAAGCCAAG AAATCAGGCA ACGTCAGCCT TCAGGCGGGG CGCGAACAGG CCCGCATGTA TGCCGATGGC TTTGAACTCA TGGGCATGCA ACGCCCGGTG ATCTTCTACA GCAACGGCTA TGAGACCTTC ATCTGGGATG ATAAGCAGTA CAACGGCTAT CGGCAGGTCT ATGGCTTCTA TGGCAAGGAC AGCTTGGAAT ATCTGATCTA CCAGCGTCAG TACCGCGTTG CCGAGCTGGA GAAACACAAC CCCGAGTTGA GCATTGCCGA CAGGCCGTAT CAGATCGAGG CGATCAAGAC CGTTGCCGCG CACTTCCAGA AGCAGCGGCG CAAGGCGCTG ATCATTCAGG CCACTGGCAC CGGCAAGACC CGCGTTGCAA TTGCTTTGGC CGAACTTCTG CTGCGCACCG GCTGGGCCAA GCGAGTGCTG TTCCTCTGCG ACCGCAAGGA GCTGCGCGTC CAGGCCGATG ATGCCTTCAA GCAGAACCTG CCCAGCGAAC CGCGCTGCGT AATCGGCGAA GCCAATAAGG TTGACCAGAC CGCGCGCATC TACATCGCTA CTTACCCGGG GATGATGAAC CGTTTCGCGC AGTTGGATGT CGGCTTCTTC GACCTGATCA TTGCTGACGA AAGCCATCGC AGCATCTATA ACAAGTACCG CGACCTGTTC GATTACTTCG ACGCTCTGCA GGTCGGGCTG ACCGCCACGC CGGTAAGGTT CATCAGCCGC AATACCTTCG ACATGTTCGA CTGCGAAACC ACCGACCCGA CCTTCGAGTT CGGCCTGGAT GCAGCCATCA ACAACGATCC GCCGTATCTG GTGCCGTTCC GCGTACGCGA CCTGACAACT GACTTCCTGC GCGATGGCAT CCACTACAAC GACCTGAATG ACGAGCAGAA GCGTCAGCTG GAAGAGGATC TGGGTGAGGA AGAGGCCAAG CGCACGACCA TCGCCGGCAA AGACATCGGT CGCAGGATCT TCAGCGAATC CACCGACCGC ATCATCCTTG AAAACCTGAT CGACAACGGC ATCAAGGATG ACACCGGCTC CCTGGTGGGC AAGACGATTA TCTTTGCCCA GCGTCAGGAT CACGCCGAGC ATCTGGAGAA AATCTTCACC AAGCTTTACC CGCAGTACGG CACGCGTGTG TGCAAGGTCA TCCACAACGA CATTCCGCAT GTGGAAACCC TGATCAAGGA GTTCAAGAAG CCGGACAACG AATTCCGCAT CGCCATTTCG GTAGACATGC TCGATACAGG CATTGACGTG CCGGAGGTAG TGAACCTGGT CTTTGCCAAG CCGGTGAAAT CCTGGGTAAA GTTCTGGCAG ATGATTGGCC GTGGCACGCG TCTTCGCCCG CATCTGTTCG GTCCGGGCAA GCATAAGGCC GAATTTCTGA TCTTTGATCA CTACGGCAAT TTCGAATTCT TCGAGCAGGA ATACCAGGAG CCGGAAGACA CCGGCGGGAA CTCGCTGCTG CAGACTACGT TTGCAGCACG TGTCGAACTT GCCCAAGTGG CGCTGAAGAA GAGCCATGCC GAGGCCTTTG ACCTGGCCGT GCGCCTGATG CGCGAAGACA TCAATGACCT GCCGGACAGC AGTGTGGCCG TGCGGCGGCA GCTGCGGTTG GTGCACCAGT TGCAGCAGAC CGACCAGCTA CGGAATTTCG ATAGCCGCAC CCAGCACCTG GTCAGTGAGG CCATATCGCC ACTGATGTCT GCCCGAGTGC TGCGCGACAA GCATGCCACC GCGCTGGACA AACTCATGGC AAACATCCAG CGTTGTCTGG TGGAGCAGGC TAGCTGTTTT GAAGATGGCA AGACCGAACT ATTGGTTGCC TTGGACAAGC TGGCAGTGAA CATTCAGGCG GTCCGGCAGA AGGATGCAGT GATTGCCGAG GTACGCAGTG CCGCATTCTG GCAGCAGGCC AGCATTGCGA GCCTAGAACA TGTCCGCAAG GAATTGCGCG GCATCATGAA GTACCGGCGC GTGGATGTTG GGCCGGGCTA TGACATGCCC ACGACCCGCA CCGGCGATGG CGGGGTGATC GAAGAGGAGC GCACGACATA CATGGTAGGA GCCAGCGAGG CGCTGATCTA CCGGCGTCGG CTCAAGCGCA TTCTCGATGA CATGCTGGCC GCGAATCCTA CCCTGCAGAA GATCCACCAA GGCCAGTCCA TTGCCGAGCA TGAGCTAAAA ACACTCACTT CTACCATCCT CACCAGCCAT CCGGGCGTCA GCTTGGAGGT GCTCAACGAG TTCTACGGCC GTACCGCCAA TGAATTGCAC CTCACCGTGC GTGAGATAAT CGGCCTGGAT GCACACGGCA TCGAAGAGCA CTTCAAGGGC TTTCTGCACG CACATCCTGG GCTTACCGCA CAACAGGTGC GCTTCATGAA CCTGTTGAAG AACTACATTG CCACCCACGG CAGCATCGTC ATTGAGACGC TCTACGAGCC GCCGTTTGAC AGCATTTCCC ACGAAGGCAT CGATGGTGTC TTTACGGCAG CGGATGTGGA TGCGCTCGTG GCTGTACTCA AACCCTTCAT GCGCGGAGAA GCCGTGTCAG CCAGCCGCTA G
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Protein sequence | MKSVNFEFLR PVNELLANLA GLAEGVLHVD PGSALTRLRS FAEELTKTIY SEERLPRLPQ STFYDLVKSP VFTACTSSSL VHQINFLRIQ GNETAHGGEG DVRTARSALK TAHELAKYMA VKYYRLAHSD LPAFVEVKDP TTALNALQKS VVSYEKELAK QQEELQRVLE QLEQKRVRDL GKVETPAPAD QRQRQERSEQ VAGSLQWSEA KTRKLLIDAM LLQAGWDVGS PAQVGLEVEV DFPGNASGKG YADYVLWGDN GQPLAVVEAK KSGNVSLQAG REQARMYADG FELMGMQRPV IFYSNGYETF IWDDKQYNGY RQVYGFYGKD SLEYLIYQRQ YRVAELEKHN PELSIADRPY QIEAIKTVAA HFQKQRRKAL IIQATGTGKT RVAIALAELL LRTGWAKRVL FLCDRKELRV QADDAFKQNL PSEPRCVIGE ANKVDQTARI YIATYPGMMN RFAQLDVGFF DLIIADESHR SIYNKYRDLF DYFDALQVGL TATPVRFISR NTFDMFDCET TDPTFEFGLD AAINNDPPYL VPFRVRDLTT DFLRDGIHYN DLNDEQKRQL EEDLGEEEAK RTTIAGKDIG RRIFSESTDR IILENLIDNG IKDDTGSLVG KTIIFAQRQD HAEHLEKIFT KLYPQYGTRV CKVIHNDIPH VETLIKEFKK PDNEFRIAIS VDMLDTGIDV PEVVNLVFAK PVKSWVKFWQ MIGRGTRLRP HLFGPGKHKA EFLIFDHYGN FEFFEQEYQE PEDTGGNSLL QTTFAARVEL AQVALKKSHA EAFDLAVRLM REDINDLPDS SVAVRRQLRL VHQLQQTDQL RNFDSRTQHL VSEAISPLMS ARVLRDKHAT ALDKLMANIQ RCLVEQASCF EDGKTELLVA LDKLAVNIQA VRQKDAVIAE VRSAAFWQQA SIASLEHVRK ELRGIMKYRR VDVGPGYDMP TTRTGDGGVI EEERTTYMVG ASEALIYRRR LKRILDDMLA ANPTLQKIHQ GQSIAEHELK TLTSTILTSH PGVSLEVLNE FYGRTANELH LTVREIIGLD AHGIEEHFKG FLHAHPGLTA QQVRFMNLLK NYIATHGSIV IETLYEPPFD SISHEGIDGV FTAADVDALV AVLKPFMRGE AVSASR
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