Gene Smal_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1021 
Symbol 
ID6478448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1165933 
End bp1167420 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content67% 
IMG OID642730185 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002027409 
Protein GI194364799 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTC CCGCCAAACC GCAGCTGTCG TTCTGGCAGA TCTGGAACAT GTGTTTCGGT 
TTCCTCGGCA TCCAGTTCGG CTTCGCCCTG CAGAACGCCA ATGCCAGCCG CATCTTCGAG
ACCCTGGGCG CGGACATGGA CGCGGTGCCG GGGCTGTGGA TCGCTGCGCC GTTGACCGGC
CTGCTGGTGC AGCCGGTGAT CGGCTACCTG TCCGACCGCA CCTGGACGCG CTGGGGCCGC
CGCCGTCCAT TCTTCATGAT CGGCGCGGTG CTGACCACAC TGGCCCTGCT GGTGATGCCG
AACTCGCCAA CGCTGTGGAT TGCCGCTGGC ACGCTGTGGG TGCTGGACGC CTCGATCAAT
GTGTCGATGG AACCGTTCCG CGCCTTCGTC GGTGACCAGC TGGCACCGCG CCAGCGTCCG
GTCGGCTACG CGATGCAGAG CTTCTTCATC GGTATCGGCG CCATCGTCGC CAGCTTCCTG
CCGTTCATCC TCGCCCATTT TGGTGTGGCC AATACCGCAG CTGCCGGCGA AGTGCCCGAT
ACCGTGCGCT ATGCGTTCTA CTTCGGTGCG GTGGTGCTGC TGGCGGCGAT CACCTGGACG
GTGGTCAGCA CCCGCGAGTA CTCACCGACG GAGCTGGCTG GCTTTGATGA TGCCGAGCCG
CCGGCGCACC ACGCAGGGAC TGCCATCAGT GGCCCGGCGC CGTGGACGCA GGTGGCGCTG
TGGCTGGGGC TCGGCGTGGT GCTGGCGCTG CTGATCGCCT GGCGGCAGGG CGACAAGATG
CTGTACGTGC TGGCGGGCTT GTGTGCGGGT TACGGCGTGC TGCTTGCGCT CGCCCGTGCG
CTGCCGGGCA CCCACATGCT GGCCGCCATT GTCGGCGATC TGCGCGCGAT GCCGGTCACC
ATGCGTCGCC TGGCGTGGGT GCAGTTCTTC TCGTGGTTCG CGTTGTTCGC GATGTGGATC
TACACCACCG CCGCGGTGGC CGGTATCCAC TTCGGCTCGA CCGATCCGCA GTCGGCGGCC
TACAACGAGG GAGCCAACTG GGTGGGGGTG CTGTTCGGCG CCTACAACGG CTTCGCTGCG
CTGGCCGCGG TACTGATCCC GCCGATGGTG CGTGCGATCG GCCTGCGTTG GAGCCACCTG
GTCAACCTGT GGCTGGGCGG TGCCGGCCTG GTGTCGCTGA TGTTCATCCG CGACCCACAC
TGGCTGCTGC TGTCGATGGT CGGCGTCGGC TTCGCCTGGG CATCCATTCT TTCGCTGCCA
TACGCACTGC TGTCCGACAG TGTGCCGGCA TCGAAGATGG GCGTGTACAT GGGCATCTTC
AATTTCTTCA TCGTGATCCC GCAGCTGGTC GCGGCCAGTG CGCTCGGCTT TGCCCTGCGC
GCCTGGCTGG GCGGTCAGCC GATGCATGTG CTGGTGCTGG GCGGCTGCAG CCTGTTCGTC
GCCGGCCTGT GCGTGCTGCG GGTTCCGTCC CGTCCGGAGG TGGTGTGA
 
Protein sequence
MSRPAKPQLS FWQIWNMCFG FLGIQFGFAL QNANASRIFE TLGADMDAVP GLWIAAPLTG 
LLVQPVIGYL SDRTWTRWGR RRPFFMIGAV LTTLALLVMP NSPTLWIAAG TLWVLDASIN
VSMEPFRAFV GDQLAPRQRP VGYAMQSFFI GIGAIVASFL PFILAHFGVA NTAAAGEVPD
TVRYAFYFGA VVLLAAITWT VVSTREYSPT ELAGFDDAEP PAHHAGTAIS GPAPWTQVAL
WLGLGVVLAL LIAWRQGDKM LYVLAGLCAG YGVLLALARA LPGTHMLAAI VGDLRAMPVT
MRRLAWVQFF SWFALFAMWI YTTAAVAGIH FGSTDPQSAA YNEGANWVGV LFGAYNGFAA
LAAVLIPPMV RAIGLRWSHL VNLWLGGAGL VSLMFIRDPH WLLLSMVGVG FAWASILSLP
YALLSDSVPA SKMGVYMGIF NFFIVIPQLV AASALGFALR AWLGGQPMHV LVLGGCSLFV
AGLCVLRVPS RPEVV