Gene Smal_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0998 
Symbol 
ID6478353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1138041 
End bp1139303 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID642730162 
ProductFeS assembly protein SufD 
Protein accessionYP_002027386 
Protein GI194364776 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.364227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.129171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC TGCTCGACTC GATGGCCCAG GCCTTCTGCG GCAGCGATGC GCGCCGCGAA 
GTGCTGGATG CGGCCCTGCG CGATGGCTTG CCGGCCGCCC GCAACGAAGC CTGGAAGTAC
ACCTCGCTGC GCCAGCTGGA GCGCCGTGCA TTCGCCGCGG CACCGCTGCA GGGCCCGGCC
CTGGACGTCG CGCTGCTGGA AGACATTCCG GCGCCGCGCC TGGTGTTCGT CAACGGTCGC
CTGGATGCCG CGCTGAGCGA CGTGCAGGCG TTGCCGGCCG GCGTGCAGCT GCAGCCGCTG
TCGGCCGCGC TGGCGGACGG TGAGGACGCC GTTCGTTTCC TCGGCCGCCG TTACGAGCGC
AGCGAAGAAA TCTTCGCCCG ACTCAACGCC GCCCTGGCCG ATGAAGGCGT GGTCCTGCGC
GTGGACGAAG GCGTGCAGGT CGAAGCCCCT CTGCAGCTGG TGTTCGCCAG CGTGGCCGGC
GACACCGACC TGGCCTGGCA TCACCGCCAC CTGATCGAAC TGCGTGCCGG CGCACAGCTG
GGCGTGGTCG AGCACCGCTT CAGCGTCGGC GATGCCGCCC ATCTGGACAA CACCGTGCTG
CATGCCCACG TCGCCCGTGA CGCGGTGCTC CAGCATGCCC GCGTCCAGGC CGGCAGCGCG
CGCCAGACCA GCTTCCTGCG CACCGATGCG GTGCTGGCCC GCGACGCGCA GTACCACCGC
GTCGACCTGG AGCTGGGTGC CGCGCTCAGC CGCCATGAAC TGAACGTGCG CCTGGAAGGC
GACAACGCCC ACCTGACCGC CAATGGCGTG CTGCTCGGCA ACGGCCGCCG CCACGTCGAG
ACCCGCCTGG GCATCGACCA CATCGCGCGC GATACCAACT GCGAGCTGTT GTGGCGCGGC
GTTGCGGCCA ACCGCAGCCG CGTGGTGTTC CATGGCGGCA TCCAGATCCG CGAAGGCGCC
GACGGCACCG ATGCCAACCT GTCCAACAAG AACCTGCTGC TGTCGCCCGA CGCCGAGATC
GACACCCAGC CGACGCTGGT GATCGACGCC GATGAGGTGA AGGCCGCGCA CGGCGCGACC
GTCGGCCAGC TCGATGCCAA TGCGCTGTTC TACCTGCGCA CGCGCGGCCT GCCGCAGGCG
CAGGCGCAGG CATTGCTGAG CGCCGCGTTC TGCCACGAGC CGCTGAAGGT GCTGCCCGAC
GCGCTGCGCT CGCAGCTGGC GCGTCGCCTG GACAAGGCCC TGGCCGAGGC AGGTGTGGCA
TGA
 
Protein sequence
MSALLDSMAQ AFCGSDARRE VLDAALRDGL PAARNEAWKY TSLRQLERRA FAAAPLQGPA 
LDVALLEDIP APRLVFVNGR LDAALSDVQA LPAGVQLQPL SAALADGEDA VRFLGRRYER
SEEIFARLNA ALADEGVVLR VDEGVQVEAP LQLVFASVAG DTDLAWHHRH LIELRAGAQL
GVVEHRFSVG DAAHLDNTVL HAHVARDAVL QHARVQAGSA RQTSFLRTDA VLARDAQYHR
VDLELGAALS RHELNVRLEG DNAHLTANGV LLGNGRRHVE TRLGIDHIAR DTNCELLWRG
VAANRSRVVF HGGIQIREGA DGTDANLSNK NLLLSPDAEI DTQPTLVIDA DEVKAAHGAT
VGQLDANALF YLRTRGLPQA QAQALLSAAF CHEPLKVLPD ALRSQLARRL DKALAEAGVA