Gene Smal_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0971 
Symbol 
ID6478326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1111473 
End bp1112642 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID642730135 
Productprotein of unknown function UPF0118 
Protein accessionYP_002027359 
Protein GI194364749 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0710399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CCCCGGAAGC GGAAATCGCG CAGTTCCTGC GCCGGCTGAA GTACATCCTG 
TTCGCCGGCC TGATCGGCTG GATCGTCTGG TTGCTGGCAC CGATCCTGAC CCCGTTCGTG
CTGGCGCTGG CGCTGGCCTG GCTGGGCGAC CCGCTGGTGG ACCGCATCGA GGCCACCGGC
CGCTCGCGCA TGACCGGCGT GGTGCTGGTG TTCGCGGCGA TGGTGCTGGT GATCGTGGCG
CTGCTGCTGG TGCTGGTGCC GATGATCGAG CGCCAGATCA CCACCCTGAT CGCGGTCGCG
CCGCAGGCAC AGGCGTGGTT GATGGAAAAG GGCATTCCCT GGTTCGAGCA GAAGACCGGC
CTGGAAGTGA TGCAGTGGAT GGATCCGGAC CGCCTGATCG AATGGGTACG CAGCCACTGG
CAGCAGGCCG GCGGCTTTGC CACCACGTTC ATGGGTTACG TCTCGCGCTC GGGCTTCGCG
ATGGTGACCT GGGTGGTCAA CATCCTGCTG CTGCCGATCC TGGCGTTCTA CTTCCTGCGT
GACTGGGACA AGCTGGTCGA GCGGGTCGCG TCGGTGATCC CGCGCAACCA GATCGGCACC
ATCAGCGCGC TGGCGCGCGA ATCCAACGAA GTGCTCGGTG CGTTCATCCG CGGGCAGTTC
CTGGTGATGT TGGCGCTGGG CGTGATCTAT GCCGGTGGCC TGTCGCTGGT CGGCCTCAAG
CTGGGCCTGT TGATCGGCCT GATTGCCGGC CTGATCAGTT TCATCCCCTA CCTGGGCGCA
ACCACCGGCA TCCTGATGGC CATCGTGGCC GCGCTGGTAC AGGCGCAGGG CTTCGACCTG
AAGCTGCTGA TCCTGGTCGG TGTGGTGTTC ACCGTGGGCC AGTTGCTGGA AAGCTACGTG
CTGACCCCGC GCATCGTTGG CGACAAGATC GGCCTGCACC CGGTGGCGGT GATCTTCGCG
GTGATGGCCG GCGGCCAGCT GTTCGGCTTC CTCGGCATGC TGCTGGCGCT GCCGGTGGCA
GCGGTGACCA ACGTGCTGCT GCGCTACGCG CACCAGCGTT ATCGCCAGAG TGAACTGTAC
GTGGGTGAGA AGCCGGCGAT CGTGCTTGAT GGCGTGGTCG ACCAGCCCCA TATCATCCTC
CCGACCGACA AGGGCCCCGA CCTGAAGTGA
 
Protein sequence
MTLTPEAEIA QFLRRLKYIL FAGLIGWIVW LLAPILTPFV LALALAWLGD PLVDRIEATG 
RSRMTGVVLV FAAMVLVIVA LLLVLVPMIE RQITTLIAVA PQAQAWLMEK GIPWFEQKTG
LEVMQWMDPD RLIEWVRSHW QQAGGFATTF MGYVSRSGFA MVTWVVNILL LPILAFYFLR
DWDKLVERVA SVIPRNQIGT ISALARESNE VLGAFIRGQF LVMLALGVIY AGGLSLVGLK
LGLLIGLIAG LISFIPYLGA TTGILMAIVA ALVQAQGFDL KLLILVGVVF TVGQLLESYV
LTPRIVGDKI GLHPVAVIFA VMAGGQLFGF LGMLLALPVA AVTNVLLRYA HQRYRQSELY
VGEKPAIVLD GVVDQPHIIL PTDKGPDLK