| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0959 |
|---|
| Symbol | |
|---|
| ID | 6478314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1102277 |
|---|
| End bp | 1103278 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642730123 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_002027347 |
|---|
| Protein GI | 194364737 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.444411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAT CCCTGTTGCC CCCCCGTTCC GTCGACCCTG CCGGCCTGGT CGCCAGTGGC
CGCCGCGTGT TCGAGATCGA GCGGCAGGCG CTGGATGCCG TGGCCGACCG CCTCGGCGAG
GCCTTCCAGC AGGCCTGCCA GGCGATCCTG GCCAGCCGCG GCCGGGTGGT CGCCACCGGC
ATGGGCAAGT CCGGGCATAT CGCCCGCAAG ATCGCCGCCA CCCTGGCCTC CACCGGGACC
CCGGCCTTCT ACGTGCACCC GGGCGAGGCC GGCCATGGCG ACCTCGGCAT GATCACCGAG
GACGACGTGG TGCTGGCGCT GTCCTATTCG GGCGAGTCGG ACGAAGTGCT GATGCTGCTG
CCGGTGCTCA AGCGCCAGGG CAACGTGCTG ATTTCCATGA CCGGGCGCCC GCAGTCCAGC
CTGGGCACCG CCGCCGACAT CCATCTGGAC GTCAGCGTAC CGGCCGAGGC CTGCCCGCTG
GCGCTGGCCC CGACCTCCAG CACCACCGCC TCGCTGGCGA TGGGCGATGC GCTGGCGGTG
GCCCTGCTCG ATGCGCGCGG CTTCACCGCC GATGACTTCG CCCGCTCGCA CCCGGCCGGC
AGCCTCGGCC GCCGCCTGCT GCTGCACATC ACCGACGTCA TGCACACCGG CGACGACCTG
CCCAGCGTCG GCGCCGGCGC CAGCCTCAGC GAAGCACTGA TGGAGATGAG CCGCAAACGG
CTCGGCATGA CCGCCGTGGT CGACGCGGAC GGCGTGCTGA TCGGCCTGTT CACCGACGGC
GACCTGCGCC GTGCGCTGGA CAGCGCGCTG GACGTACGCA CGGCGAAGAT CGCCGATGTG
ATGACCCGCA ACCCGCGCAC CATCGGTGCC GACCAGCTGG CGGTCGAGGC CGCGCGCCTG
ATGGAAACCC ACAAGATCAC CGGCCTGATC GTGGTCGATG GCCAGGGCCG CGCGGTCGGT
GCCCTGAACA TTCATGACCT GTTGCGGGCG CGGGTGGTTT AA
|
|---|
| Protein sequence | MAESLLPPRS VDPAGLVASG RRVFEIERQA LDAVADRLGE AFQQACQAIL ASRGRVVATG
MGKSGHIARK IAATLASTGT PAFYVHPGEA GHGDLGMITE DDVVLALSYS GESDEVLMLL
PVLKRQGNVL ISMTGRPQSS LGTAADIHLD VSVPAEACPL ALAPTSSTTA SLAMGDALAV
ALLDARGFTA DDFARSHPAG SLGRRLLLHI TDVMHTGDDL PSVGAGASLS EALMEMSRKR
LGMTAVVDAD GVLIGLFTDG DLRRALDSAL DVRTAKIADV MTRNPRTIGA DQLAVEAARL
METHKITGLI VVDGQGRAVG ALNIHDLLRA RVV
|
|---|
| |