Gene Smal_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0955 
Symbol 
ID6478310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1099715 
End bp1100434 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID642730119 
ProductABC transporter related 
Protein accessionYP_002027343 
Protein GI194364733 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.236183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCG CCAAGGGCCT GCGCAAGCGC TACAAGCAAC GCGAAGTCGT CAAGGATTTC 
GGGTTGACCC TCGATGCCGG TGAAGTGGTC GGCCTGCTCG GCCCGAACGG CGCCGGCAAG
ACCACCTGCT TCTACATGAT CGTCGGCCTG GTCGCCGCCG ATGCCGGCAG CATCGTGCTT
GACGGCAAGG ACATCACCGG TGACCCGATG TACACCCGCG CCAAGCAGGG GGTGGGTTAC
CTGCCGCAGG AACCGTCGGT GTTCCGCAAG TTGAGCGTGG CCGACAACAT CCGCCTGGTG
CTGGAACTGC GCGAGGACCT CGATTCGAAG GGCCGCGAGC GCGAATTGAA CAGCCTGCTC
GACGAACTGC AGCTGGGCCA CGTGGCCGAC CAGCTCGGTG CCAGCCTGTC CGGCGGCGAG
CGCCGCCGTT GCGAGATCGC CCGCGCACTG GCAGCACAAC CGCGCCTGAT CCTGCTCGAC
GAGCCGTTCG CCGGCGTCGA TCCGATTTCG GTCGGCGAGA TCCAGCGCAT CGTCACCCAC
CTCAAGCAGC GTGGCATCGG CGTGCTGATC ACCGACCACA ACGTGCGCGA GACCTTGGGA
ATCTGCGACC GCGCGTATAT CCTCGCCGAG GGCAGCGTGC TGGCCCAAGG CTCGCCGGAA
GCGATCCTGG ACAACGCCGA CGTGCGTCGC GTCTACCTTG GGGATTCCTT CAAGCTGTGA
 
Protein sequence
MLVAKGLRKR YKQREVVKDF GLTLDAGEVV GLLGPNGAGK TTCFYMIVGL VAADAGSIVL 
DGKDITGDPM YTRAKQGVGY LPQEPSVFRK LSVADNIRLV LELREDLDSK GRERELNSLL
DELQLGHVAD QLGASLSGGE RRRCEIARAL AAQPRLILLD EPFAGVDPIS VGEIQRIVTH
LKQRGIGVLI TDHNVRETLG ICDRAYILAE GSVLAQGSPE AILDNADVRR VYLGDSFKL