| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0954 |
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| Symbol | |
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| ID | 6478309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1098250 |
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| End bp | 1099674 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642730118 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_002027342 |
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| Protein GI | 194364732 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.550779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC GGCTGCAGAC ATCGTTGGGA CAGCAGCTGG TGCTCACGCC CCAGCTGCAA
CAGGCGATCA AGCTGCTGCA GATGTCCAGC ACCGAGCTGG AACTGGAAAT CGCGCAGGCA
GTGGAAAGCA ATCCACTGCT GGACTGGGCC GACAGCAGCG ACAGCAGCAG CGCCGCCAAC
GAAACCAGTG ACAACCCCGA CGGCGATGCA GCGGCCGAAC GTGCCGACAA CGGCGACGAC
TGGGCGCCGG CCGAACTGGA CTGGAGCGCG GCCGGCAGCG GCGGCAGCTT CGACGATGAC
GACGATACCG GCAGTGCCGC CGAACGCGTG GCCGAAACCG AAACCCTGGC CGATCATCTG
CTGTGGCAGC TGCACCTGTC GCACCTGACC GCACGTGATC GCAGCATCGG TGCCGCACTG
ATCGATGCAC TGGACGACGA TGGCTACCTG CGCGAACCGC TGGCAGGCAT CGCCGAAACC
CTGCTGCCGG CCATCCATGC CGACCAGGAC GAGATTCTTG CCGTGCTGCA CCGGATCCAG
CGTTTCGATC CGGTCGGCGC GGCCGCGCGC ACCCTCGGCG AATGCCTGCA GCTGCAGCTG
GAGGTGCTGG ACGACACCAC ACCGGGCCTG GCATTGGCGC GACAGATTGC CGCGGGCCCG
CTGGAACGGT TGCCGCGCAG CGGCGTGGCC GGGCTGGCCC ACGAGTTGAA ACTGCCGCTG
GCCGAGGTCG AGACTGCAGT GACCCTGCTG CGTTCGCTGG ATCCTCGGCC GGGCACGCAG
ATCGCCCCCC TGTCGCAGGA CACCTACGTG GTACCCGATG TCGTGGTGTG GCGGCAGAAC
GGCGTGTGGC GCGCTGCACT GGCCGCGCAT GCCGGGCCAA GGGTGGTGAT CCACCGCGGC
TACGAACAGC TGATCCGCCG CTGTGGCGAG GCCGATGCCG GCTACCTGCG TGCACAGCTG
CAGGAAGCGC GCTGGCTGCT GAAAGGGCTG CAGCAGCGTG GCGAAACCCT GCTGCGCGTC
GTGCGCAGCC TGATCCTGCA ACAGGCTGGC TTCCTTGAAT TCGGCGAACA GGCGCTGCGC
CCTCTGACAC TGCGCGAGAT CGCCGCCGAG CTCGGCCTGC ACGAATCGAC GGTGTCGCGC
GCGATTGCCC GCAAGCACGT GCGTACGCCA CGCGGCACCC TGCCCCTGCG CGCCTTCTTC
GCCTCCGGCA TCGACACCGA AGGCGGCGGC GAGGCCTCCA GCACGGCCAT CCAGGCGATG
ATCCGACGCC TGATCGACGA CGAGAACCCA CGCAAGCCGC TTTCTGACGC CAAGCTGGCT
GACCTGCTCA AATCGTCGGG AATTCCAGTA GCGCGGCGCA CCGTGGCGAA GTATCGTGAA
GCCATGAACA TCTCCGCCTC GCACGAAAGG GTCAGAATCG CTTGA
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| Protein sequence | MKTRLQTSLG QQLVLTPQLQ QAIKLLQMSS TELELEIAQA VESNPLLDWA DSSDSSSAAN
ETSDNPDGDA AAERADNGDD WAPAELDWSA AGSGGSFDDD DDTGSAAERV AETETLADHL
LWQLHLSHLT ARDRSIGAAL IDALDDDGYL REPLAGIAET LLPAIHADQD EILAVLHRIQ
RFDPVGAAAR TLGECLQLQL EVLDDTTPGL ALARQIAAGP LERLPRSGVA GLAHELKLPL
AEVETAVTLL RSLDPRPGTQ IAPLSQDTYV VPDVVVWRQN GVWRAALAAH AGPRVVIHRG
YEQLIRRCGE ADAGYLRAQL QEARWLLKGL QQRGETLLRV VRSLILQQAG FLEFGEQALR
PLTLREIAAE LGLHESTVSR AIARKHVRTP RGTLPLRAFF ASGIDTEGGG EASSTAIQAM
IRRLIDDENP RKPLSDAKLA DLLKSSGIPV ARRTVAKYRE AMNISASHER VRIA
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