Gene Smal_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0953 
Symbol 
ID6478308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1097874 
End bp1098191 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID642730117 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_002027341 
Protein GI194364731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.587783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG AAACGTTTGG CAAAGATGTC GAAGTCACCC CGGCCCTGCA GTCCTATGTA 
GAGGAGAAGC TGGCCCGGAT CGGCAAACAC TTCGACCAGC ACTGCGAAGC GCGGGTGACC
CTCAAGCTGC AGAAGACCGA ACACCACGTC GACGCCAGCC TCAACATTCC CGGCCAGACC
CTGCACGCCG AGGCCAATGC CCAGACCATG TATGCCGCGA TCGACCTGCT TGCGGACAAG
CTTGACCGTC TGGTGATCAA GCACAAGGAG AAAAAACAGC AGCACGCGCC ACTGCCGGTG
GGCGACAATG GTGGCTGA
 
Protein sequence
MRIETFGKDV EVTPALQSYV EEKLARIGKH FDQHCEARVT LKLQKTEHHV DASLNIPGQT 
LHAEANAQTM YAAIDLLADK LDRLVIKHKE KKQQHAPLPV GDNGG