Gene Smal_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0952 
Symbol 
ID6478307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1097400 
End bp1097852 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content72% 
IMG OID642730116 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_002027340 
Protein GI194364730 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.628974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA CTGACCTCCT GGCGGCCGTG CAGACCCAGC TCTGCACGGC CACCGACCGC 
GACAGCGTCC TGCAGGCCGC CGCCGGGTTG CTGGCCTGCC GCCAGGCCAA CGCCGAACAG
ATCTACCTGA ACCTGTGCCA GCGCGAAGCG CTGGGCAGCA CTGCGATCGG CCACGGCATC
GCCATCCCCC ACGGCCGCGC GCCGACGCTG GACCGCCCCC GTGGCGCACT GCTGCGGCTG
GCCACCCCGG TCGACTTCGG TGGCGATGAG CCGGTGGACC TGGTGTTCGC GATGGCCGTC
CCTGCCCACT ACACCCACCA GCACCTGATG CTGCTGTCCG AGCTGGCCGA GCTGTTCTCG
ATGCCCGCCA TCCGCGATGC CCTGCGCGCG GCCGGCGATG CCCGGGCCCT GCGCGAGGCG
CTGGAGCTGA CCCCACCTGC GAGTGCCGCA TGA
 
Protein sequence
MPLTDLLAAV QTQLCTATDR DSVLQAAAGL LACRQANAEQ IYLNLCQREA LGSTAIGHGI 
AIPHGRAPTL DRPRGALLRL ATPVDFGGDE PVDLVFAMAV PAHYTHQHLM LLSELAELFS
MPAIRDALRA AGDARALREA LELTPPASAA