Gene Smal_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0940 
Symbol 
ID6478295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1086924 
End bp1087490 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID642730104 
Producthypothetical protein 
Protein accessionYP_002027328 
Protein GI194364718 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.335136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.481513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAA CGCCGACCTC CCTCGCCGAT CACCTGCTCG TTGCGCTGCC GTCGCTGCTC 
GACGCGACCT TCGCCCGCAG CGTCGCGCTG ATCTGCCAGC ACGACGAGAA CGGTGCGATG
GGTGTGCTGG TCAACCAACC TTCCGAATAC ACGCTGGGCG AAGTGCTGGC ACAGATGGAC
ATCACCACCG GTGATGGCGA CCTGCAGGCG CGCATGGTGC TCAATGGCGG CCCGGTGCAT
CCCGAACGCG GCTTCGTCAT CCATGACGAC GCGCGCGCAT GGGATTCCAG CCTGATCGTG
GGTGAAGGCC TGTACCTGAC CACCTCGCGT GACATCCTCG AAGCGATGGC GCGCGGCGAA
GGCCCGGCCA ATGCCGTGGT CACGCTGGGC TGTGCGGGCT GGGGCGCAGG GCAGCTGGAA
AGCGAGCTGT CCGAGAACAG CTGGCTGACC GTGCCAGCCG ATGCCGAGCT GGTGTTCCAG
CTGCCGCTGG AGCAGCGCTG GCAGGGCGCG GCCTCGCGCA TCGGCGTGGA CCTGTTCCGG
CTGACCGATT ACAGCGGCCA TGTCTGA
 
Protein sequence
MPVTPTSLAD HLLVALPSLL DATFARSVAL ICQHDENGAM GVLVNQPSEY TLGEVLAQMD 
ITTGDGDLQA RMVLNGGPVH PERGFVIHDD ARAWDSSLIV GEGLYLTTSR DILEAMARGE
GPANAVVTLG CAGWGAGQLE SELSENSWLT VPADAELVFQ LPLEQRWQGA ASRIGVDLFR
LTDYSGHV